Protein Alignment Arc42 and IVD

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_190116.1
• Gene: IVD / 823668
• AraportID: AT3G45300
• Length: 409
• Species: Arabidopsis thaliana
• Alignment Length: 351
• Identity: 62/351 - (17%)
• Similarity: 94/351 - (26%)
• Gaps: 150/351 - (42%)

  Fly   229 SLDVGLKDRSKYGTVRSWGAASVPAAHGEFHPCD------GFAGLTGEFFPSRIERD-QAIVIVL 286
            |:|.|:...:..|....|        ||.....|      |..|..|...|....|: .|:....
plant    76 SVDSGVSKGTNLGAQPGW--------HGVSRGQDSAMQRGGGNGTNGAGNPGHRHRNGSALSRKN 132

  Fly   287 PEL-------------CRRLTLEFDREQLVAGIMGFRYAVRLVRPFRSAQMSESNMQSCPDTSIR 338
            |.:             ..|..|:|:.|...:           :.|....|:.:|.....|.
plant   133 PSMQEKQPPEAREEKNAERKKLQFEEEDFPS-----------LNPETGKQVIQSKQTGAPT---- 182

  Fly   339 LGRYGILNTNECNGFPL-------------------YESDQAHVSSNESTSFSSDSDLLYYLLEP 384
                |:.........||                   :.:..:|: ||.|...:|...::|..|.|
plant   183 ----GVWENPPSAKQPLKMLVIKKISKEDPSAFSAAFATPVSHI-SNGSNKTNSSGPIVYKNLVP 242

  Fly   385 -TTGTVIESNIDLTYHTFLRPNEHIALFQSVPELRIPLFRFARYYRLSE------LKAAKLRQLL 442
             ...:.|:....:|                 |.|.:.:.|..|..|.:.      |||.|..|.:
plant   243 KPAASSIKGTASVT-----------------PPLELGVSRLTRMTRRTPDRKSEFLKALKDEQDV 290

  Fly   443 HLL---------DVGHQIALAGCVAGLTIILLAVVYACWKAQRPSKTNNDQYRIIGMQLSDG--- 495
            .|.         ||                         :.|.||:.|:    |.|.|:.:|
plant   291 DLSEDRDGDKLEDV-------------------------QMQSPSELND----IEGEQIEEGCHH 326

  Fly   496 ------------------GREHNLLK 503
                              ..||.|||
plant   327 NGISGSQEESRERLSYSLEAEHRLLK 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	36/211 (17%)
IVD	NP_190116.1	PLN02519	32..409	CDD:215284	62/351 (18%)