DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and ACX5

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_181112.1 Gene:ACX5 / 818138 AraportID:AT2G35690 Length:664 Species:Arabidopsis thaliana


Alignment Length:339 Identity:75/339 - (22%)
Similarity:130/339 - (38%) Gaps:73/339 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 GNDAQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIAT--DKGDHFVLN-----GTKAWITN 181
            |.:.|::.:::..|..:.:||:|.:|.|:||:.....|.||  .|.|.|:::     .:|.|...
plant   114 GTEQQQQKWLSLATKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDQFIIHSPTQTSSKWWPGG 178

  Fly   182 AFEAEA-AIVFATTNKQLKHKGISAFIV-----------PKATKGFSLGKKEDKLGIRGSSTCQL 234
            ..:... |:::|......|..|:..|||           |..|.| .:|.|.............|
plant   179 LGKVSTHAVIYARLITNGKDHGVHGFIVQLRSLDDHSPLPGITVG-DIGMKFGNGAYNSMDNGFL 242

  Fly   235 IFEDCVVPKENMLGEPGFGFKIAMQT-------LDAGRIGIAGQALGIGQA-----------ALE 281
            :|:...:|::.||      .:::..|       .|..|..:.|..:.:.|:           |:.
plant   243 MFDHFRIPRDQML------MRLSKVTREGKYVASDVPRQLVYGTMVYVRQSIVSNASTALARAVC 301

  Fly   282 LAVDYAQKRQAFGKPIA--KLQSIQQKIADMSL--AMESARLLTWRAAWLKDQKQPYTKEAAMAK 342
            :|..|:..|:.||....  :.|.|..|.....|  .:.||....:...|||......||     :
plant   302 IATRYSAVRRQFGSHDGGIETQVINYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTK-----R 361

  Fly   343 LAASEAATL-----CS---------------HQCIQILGGMGYVTDMAAERHYRDARITEIYEGT 387
            |.||:.|||     |:               .:|.::.||.||:........:........|||.
plant   362 LEASDFATLPEAHACTAGLKSMTTSATSDGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGD 426

  Fly   388 SEIQRLVIAGSILK 401
            :.:.:|.:|..::|
plant   427 NVVLQLQVARFLMK 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 74/337 (22%)
ACX5NP_181112.1 PLN02443 1..664 CDD:178062 75/339 (22%)

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