DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and acad9

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001038772.1 Gene:acad9 / 724002 ZFINID:ZDB-GENE-060616-196 Length:630 Species:Danio rerio


Alignment Length:423 Identity:165/423 - (39%)
Similarity:240/423 - (56%) Gaps:36/423 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TRSLCIAR----RSLNARQI-----ASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPE 61
            :|||..|:    ..:|.:::     .|...|.|.:|.:|...:.|  || |.::||.|||...|.
Zfish    44 SRSLAYAKDLFLGKVNKKEVFPYPEISNEELEELNQFVQPVEKFF--NE-SVDSAKIDREANIPP 105

  Fly    62 KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGND 126
            :.:..:.|||:..:.||||.||.||....|| .:.||:....|..|.::.:.::.|..:|..|.|
Zfish   106 ETLDGLKELGLFGIQIPEEYGGLGLSNTMYA-RLGEITSLDGSIAVTLAAHQAIGLKGILIAGTD 169

  Fly   127 AQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIA--TDKGDHFVLNGTKAWITNAFEAEAAI 189
            |||..|:....|||.:..|.|:|||:||||.:....|  |:.|.|::|||||.||:|...|:...
Zfish   170 AQKAKYLPKLATGEHIAAFCLTEPGSGSDAASIQLRATLTEDGKHYLLNGTKFWISNGGWADIMT 234

  Fly   190 VFATT-----NKQLKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGE 249
            |||.|     :.|.|.| |:||||.:|..|.:.||.|||||||||:|.::.|||..||.||::||
Zfish   235 VFARTEVVDKDGQKKDK-ITAFIVERAFGGVTSGKPEDKLGIRGSNTTEITFEDTKVPIENVIGE 298

  Fly   250 PGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSL-- 312
            .|.|||:||..|:.||..:.|...|:.:..:||:.:||..|:.|.:.:::...||.|.|.|:|  
Zfish   299 VGDGFKVAMNILNNGRFSMGGAGAGVVKKLIELSAEYAGTRKQFNRRLSEFGMIQDKFATMALNV 363

  Fly   313 -AMESARLLTWRAAWLKDQK--QPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERH 374
             .|||...||   |.:.|:.  ...:.||||.|:.:||...:|..:.:|:|||:|:..:...||:
Zfish   364 YVMESMAYLT---AGMMDRPGLPDCSLEAAMVKVFSSEGTWICVSEALQVLGGLGFTKNYPYERY 425

  Fly   375 YRDARITEIYEGTSEIQRLVI-------AGSIL 400
            .||.||.:|:|||:||.|:.:       ||.||
Zfish   426 LRDCRILQIFEGTNEILRMYVALTGMQHAGKIL 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 158/391 (40%)
acad9NP_001038772.1 VLCAD 48..455 CDD:173850 158/414 (38%)

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