DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Acadsb

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_080102.1 Gene:Acadsb / 66885 MGIID:1914135 Length:432 Species:Mus musculus


Alignment Length:418 Identity:74/418 - (17%)
Similarity:137/418 - (32%) Gaps:130/418 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 AQAILEHQASSA----SFQEIG------------PFQYEEVAEVVDVKYHQANGTLSYRKRTFFR 118
            ||||.|...::|    |..|:.            |.|..::|:.:     |.:|      |.:.:
Mouse   806 AQAIREFALTAAAEAYSLCEVSVTPEGVIKQRRLPEQLSKLADRI-----QLSG------RYYLK 859

  Fly   119 PSGPHSTTTNGTESERIISVNFVALLASHFGHSMDYSVQRELSFMLHNFRQTVTVTRTIGQLLF- 182
            .:....|..:..:::.::..:.::||              :||        ||.|...:....| 
Mouse   860 SNMETETLCSDEDAQELLRESHISLL--------------QLS--------TVEVATQLSMRAFE 902

  Fly   183 -------TGYREPMMEPLRKLVCPTKRRSVACQDERLAYFRTFNVTRRASEV-------YSLDVG 233
                   |.|.:.:.:...:|..|...:.......|..::....|.|.|:::       :.:.:.
Mouse   903 LFCAIEPTEYIDDLFKLKTRLTGPPSLKLFEEAINRETFWVATEVVREANQLKRMKIVKHFIKIA 967

  Fly   234 LKDR------SKYGTVRSWGAASVPAAHGEFHPCDG-----FAGLTGEFFPSR-------IERDQ 280
            |..|      |.:..:.....|.|....|.:.....     |:.|...|.|||       :...|
Mouse   968 LHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFSDLQDLFDPSRNMAKYRNLLNSQ 1032

  Fly   281 ----AIVIVLPELCRRLT-LEFDREQLVAGIMGFRYAVRLVRPFRS-AQMSESNM---------- 329
                .|:.:.|.:.:.|| |....:..|.|::.|.....:.:..|. .:|:..||          
Mouse  1033 NLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKEIRHVGRMAAVNMDPALMFRTRK 1097

  Fly   330 ----------QSCPDTSI-----------RLGRYGILNTNECNGFPLYESDQ-----AHVSSNES 368
                      |...:.::           |:.|...||..:     |||..|     ....||.:
Mouse  1098 KKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLNAKK-----LYEDAQMARKVKQYLSNLT 1157

  Fly   369 TSFSSDS-DLLYYLLEPTTGTVIESNID 395
            ...:.:| ..|....||:..|:.:|:.|
Mouse  1158 LETNEESLQTLSMQCEPSINTLPKSSGD 1185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 74/418 (18%)
AcadsbNP_080102.1 SCAD_SBCAD 59..430 CDD:173847
Blue background indicates that the domain is not in the aligned region.

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