Protein Alignment Arc42 and acox1

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001005933.1
• Gene: acox1 / 449662
• ZFINID: ZDB-GENE-041010-219
• Length: 660
• Species: Danio rerio
• Alignment Length: 426
• Identity: 99/426 - (23%)
• Similarity: 159/426 - (37%)
• Gaps: 93/426 - (21%)

  Fly    40 DFANNELS--GNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGC 102
            ||.:.:|:  ..:.::|.......:.|.::.|.|   ::.|||:           .:.:.:.||.
Zfish    45 DFQHEDLNFLSRSERYDAAVRKSAQMILKLREYG---ISDPEEI-----------YSYKTVVRGV 95

  Fly   103 ASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIAT--D 165
            ....  :.|:|.:::..|.|.....|:|.:|....:...:|.:|.:|.|:|:...|..|.||  .
Zfish    96 FQEP--LGVHNVMFIPTLKSQCTAEQRKKWIPLAESFHMLGTYAQTELGHGTHIRALETTATYDP 158

  Fly   166 KGDHFVLNGT-----KAWITNAFE-AEAAIVFATTNKQLKHKGISAFIVP-KATK------GFSL 217
            ....||||.:     |.|.....: :..|||.|....|.|..|:.|||.| :..|      |..:
Zfish   159 STQEFVLNSSTISSIKWWPGGLGKTSNHAIVLAQLYTQGKCHGLHAFITPIRCMKTHMPLPGVVV 223

  Fly   218 GKKEDKLGIRGSSTCQLIFEDCVVPKENML-----GEPGFGF------KIAMQTLDAGRIGIAGQ 271
            |....|.|........|..|:..:|:||||     .||...:      |:...|:...|..|.|:
Zfish   224 GDIGPKFGFDEVDNGYLKLENVRIPRENMLMKYAQVEPDGTYVKPPSDKLTYGTMVFIRSMIVGE 288

  Fly   272 ALGIGQAALELAVDYAQKRQAF----GKP---IAKLQSIQQKI---------------------- 307
            :......:..:|:.|:..|...    |:|   |...|:.|.|:
Zfish   289 SARALSKSCTIAIRYSAVRHQSELRPGEPEPQILDYQTQQYKLFPLLATAYAFHFVGQYMNKTYH 353

  Fly   308 ---ADMSLAMESARL--LTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVT 367
               .|:||. :.:.|  |...:|.||          |....||:....:|...|    ||.||..
Zfish   354 RISGDISLG-DFSELPELHALSAGLK----------AFTTWAANTGIEVCRMSC----GGHGYSR 403

  Fly   368 DMAAERHYRDARITEIYEGTSEIQRLVIAGSILKEY 403
            ..:....|.....|..|||.:.:..|..|..::|.|
Zfish   404 CSSLPDIYVTFTPTCTYEGENTVMMLQTARYLVKSY 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	97/422 (23%)
acox1	NP_001005933.1	AXO	3..637	CDD:173839	99/426 (23%)