Protein Alignment Arc42 and CG4860

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_650163.2
• Gene: CG4860 / 41480
• FlyBaseID: FBgn0037999
• Length: 415
• Species: Drosophila melanogaster
• Alignment Length: 412
• Identity: 251/412 - (60%)
• Similarity: 316/412 - (76%)
• Gaps: 11/412 - (2%)

  Fly     1 MQSVLTRSLCIARRSLNA----------RQIASLSALSETHQMLQKSCRDFANNELSGNAAKFDR 55
            ||.::..:..:.:||..|          |.||.|:|||||||:|||:||:|||.||:..|...||
  Fly     1 MQQLIRVARTLGQRSSGAWSARIIAGGNRGIACLAALSETHQILQKTCREFANAELAPKARHHDR 65

  Fly    56 EHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPL 120
            |.|||.:|:|::||||:|:|.:.||.||:||||.||||.|||::||.|:..::|.||| ||||.:
  Fly    66 EELYPAEQVRRLGELGLMSVTVREEYGGSGLDYQAYAIGMEEVARGDAAVSIVMGVNN-LYLGAV 129

  Fly   121 LSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEA 185
            ...|.:.||:|::.|:|.||.:..:||||||||||||||||.|..:||.:.:|||||||:|:.||
  Fly   130 QQHGTEQQKQDFLVPYTQGEHIAFYALSEPGNGSDAGAASTTAKLQGDSYQINGTKAWISNSKEA 194

  Fly   186 EAAIVFATTNKQLKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEP 250
            ...|||||.:|.:|||||:||:.||...|.|:.|||.|:|:|.:|||||:.||..||:..:||..
  Fly   195 SGGIVFATVDKSMKHKGITAFLTPKDVPGLSIAKKESKMGMRATSTCQLVLEDVHVPRSRVLGAA 259

  Fly   251 GFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315
            |.|||||||:||.||||||.||.||.||||||||||:|||.||||.:|:||.||||:|||:..:|
  Fly   260 GDGFKIAMQSLDCGRIGIAAQATGIAQAALELAVDYSQKRVAFGKHLARLQLIQQKLADMATRVE 324

  Fly   316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARI 380
            .:||||||||||||...|.|||||||||.|||:||.|:||||||||||||.||:.||.:||:||:
  Fly   325 ISRLLTWRAAWLKDNGLPITKEAAMAKLHASESATFCAHQCIQILGGMGYTTDLPAELYYRNARV 389

  Fly   381 TEIYEGTSEIQRLVIAGSILKE 402
            ||||||||||||:|||.::|:|
  Fly   390 TEIYEGTSEIQRIVIANAVLRE 411

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	237/371 (64%)
CG4860	NP_650163.2	SCAD_SBCAD	39..410	CDD:173847	237/371 (64%)