DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and acads

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_989269.1 Gene:acads / 394882 XenbaseID:XB-GENE-855930 Length:409 Species:Xenopus tropicalis


Alignment Length:406 Identity:287/406 - (70%)
Similarity:338/406 - (83%) Gaps:4/406 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVLTRSLC--IARRSLN-ARQIASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQI 64
            |||. .||  .||.:|. ...:...:.|.||||||:.:||:||..||...||..||||.:|..|:
 Frog     5 SVLL-GLCHRAARAALRPLHTVYQTAELPETHQMLRDTCREFAEKELQPIAAGLDREHRFPRDQV 68

  Fly    65 RQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQK 129
            ||||::|::||.:||||||.||||:||:||:|||||||||.||||||||||||||:|..|::.||
 Frog    69 RQMGQIGLLAVEVPEELGGAGLDYLAYSIAVEEISRGCASTGVIMSVNNSLYLGPILKHGSEEQK 133

  Fly   130 KDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATT 194
            :.:|:||.:|:::|||||||||||||||||||.|...|:.:||||||:|||||::|.||:|.|||
 Frog   134 RQWISPFCSGDKIGCFALSEPGNGSDAGAASTTAKLDGEEWVLNGTKSWITNAWDASAAVVLATT 198

  Fly   195 NKQLKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQ 259
            :|.|||||||||:|...|.|.||||||||||||.|||..||||||.:|::|:||:||.|||||||
 Frog   199 DKSLKHKGISAFLVEMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPRQNLLGQPGMGFKIAMQ 263

  Fly   260 TLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRA 324
            ||||||||||.||||||||||:.|||||:||.|||.||:|||:||.|:|||:||:||||||||||
 Frog   264 TLDAGRIGIASQALGIGQAALDCAVDYAEKRLAFGAPISKLQAIQFKLADMALALESARLLTWRA 328

  Fly   325 AWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSE 389
            |.:||.|:|:||||||||||||||||..|||.||||||||||:||.|||||||||||||||||||
 Frog   329 AMMKDNKKPFTKEAAMAKLAASEAATQISHQAIQILGGMGYVSDMPAERHYRDARITEIYEGTSE 393

  Fly   390 IQRLVIAGSILKEYAS 405
            |||||||..:||||.|
 Frog   394 IQRLVIANQLLKEYRS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 273/371 (74%)
acadsNP_989269.1 SCAD_SBCAD 33..405 CDD:173847 273/371 (74%)

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