DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and acadl

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_957475.1 Gene:acadl / 394156 ZFINID:ZDB-GENE-040426-771 Length:442 Species:Danio rerio


Alignment Length:386 Identity:126/386 - (32%)
Similarity:212/386 - (54%) Gaps:7/386 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTG 85
            |.:....||.|.:.:::.|.|...|::...|::::......:...:.||.|::.|..|||.||.|
Zfish    59 IGTRRIFSEEHDLFRQNVRRFFQEEVAPYHAQWEKAGEVSREVWEKAGEHGLLGVYTPEEHGGIG 123

  Fly    86 LDYVAYAIAMEE-ISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSE 149
            .|.::.||..|| :...|:..|  .|:::.:.:..:..:|:.||.:.||.....|:.:|..|::|
Zfish   124 GDLLSAAIVWEEQMYSNCSGPG--FSLHSEIVMPYISHYGSKAQIERYIPQMAAGKCIGAIAMTE 186

  Fly   150 PGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLK---HKGISAFIVPKA 211
            ||.|||...|.|.|...|..::|||:|.:|||.:.::..||.|.|:::.|   | |||.|:|.:.
Zfish   187 PGAGSDLQGAKTFAKKDGTDWILNGSKVFITNGWMSDVVIVVAVTDREAKTAAH-GISLFLVDRG 250

  Fly   212 TKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIG 276
            |||:..|:|.:|||::...|.:|.|||..:|.|.:||:...||...|..|...|:.||...|...
Zfish   251 TKGYQKGRKLEKLGLKAQDTAELFFEDVRLPAEALLGQVNKGFYYLMNELPQERLLIAVMGLASC 315

  Fly   277 QAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMA 341
            :...|.:.:|..:|:|||:.||.||.:|.|:|::...:...|........|..:|:..:..|:||
Zfish   316 EFMFEESRNYVMQRKAFGRTIADLQVVQHKLAELKTEICVGRAFIDSCLQLHSEKKLDSSTASMA 380

  Fly   342 KLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKE 402
            |..|::.....:.||:|:.||.||:.:....:.:.|||:..||.||:||.:.:|:.:|:.:
Zfish   381 KYWATDLQNRVATQCLQLHGGWGYMWEYPIAKAFADARVQPIYGGTNEIMKELISRNIVSK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 124/375 (33%)
acadlNP_957475.1 LCAD 67..439 CDD:173849 123/374 (33%)

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