DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Acox57D-d

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_523803.1 Gene:Acox57D-d / 37446 FlyBaseID:FBgn0034629 Length:677 Species:Drosophila melanogaster


Alignment Length:412 Identity:93/412 - (22%)
Similarity:151/412 - (36%) Gaps:67/412 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNN 113
            |......|.:| ...::::.|..|...|:..:|...|.|.....:...: |.|...|...::.:.
  Fly    62 NHEYMSHEEVY-NSTVKKVAEAAVKLKALQNKLNPGGTDIWPGGLFNAQ-SFGLFPANHPIATHI 124

  Fly   114 SLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIA--TDKGDHFVLN--- 173
            ::::..:...|...|.:.:.........:|.:|.:|..:|::....:|.|  ..|.|.||||   
  Fly   125 TMFVDVIKGQGTAEQVEKWGKAAENCNIIGTYAQTELAHGTNVRGLATRADFDPKTDEFVLNTPN 189

  Fly   174 --GTKAWITN-AFEAEAAIVFATTNKQLKHKGISAFIVP-------KATKGFSLGKKEDKLGIRG 228
              ..|.|... ...|..|:|.|.......|.|:..||||       ....|..:|:...|||:..
  Fly   190 LEAYKWWPGGLGHTANHAMVVAQLYIADVHHGVQMFIVPLRDSETHMPLPGVDIGEIGKKLGMAS 254

  Fly   229 SSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLD-------AGRIG----------IAGQALGIG 276
            .:...|......:|:.|||      .|.|....|       |.||.          |..|...:.
  Fly   255 VNQGFLGLNHVRIPRTNML------MKFAKVERDGTFKASPASRINYLTMVYTRCLIVSQNSTLL 313

  Fly   277 QAALELAVDY-AQKRQAFGKPIAKLQSIQQKIAD-----MSLAMESARLLTWRAA--WLKDQKQP 333
            .||..:|..| |.:||:   ||...|. :.:|.|     :.|..|.|..:.:..|  ::.:....
  Fly   314 LAAATIATRYSAVRRQS---PIEPNQP-EPQIIDHVTQRLKLFPEIATGIAYHLATEYMWEMYAQ 374

  Fly   334 YTKEAAMAK--------LAASEAATLCSHQ-CIQI------LGGMGYVTDMAAERHYRDARITEI 383
            ..:||...|        :.:.....||:.. |..|      .||.||:........|.:|.....
  Fly   375 TVQEANNGKFERLPDMHILSCALKVLCTTDGCAGIEKLRLSTGGHGYLIAANLSNIYGNAVAAYT 439

  Fly   384 YEGTSEIQRLVIAGSILKEYAS 405
            |||.:.:..|.|..:::|.:||
  Fly   440 YEGENTVLLLQIGRALVKAWAS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 90/406 (22%)
Acox57D-dNP_523803.1 ACAD 14..653 CDD:447864 93/412 (23%)

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