Protein Alignment Arc42 and Gcdh

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: XP_063134240.1
• Gene: Gcdh / 364975
• RGDID: 1308829
• Length: 472
• Species: Rattus norvegicus
• Alignment Length: 367
• Identity: 108/367 - (29%)
• Similarity: 176/367 - (47%)
• Gaps: 18/367 - (4%)

  Fly    27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAY 91
            |:...::::.:.|::....|.......:|..::....:.:||||||:...| :..|..|:..|||
  Rat    69 LTADEKLIRDTFRNYCQERLMSRILLANRNEVFHRDIVYEMGELGVLGPTI-KGYGCAGVSSVAY 132

  Fly    92 AIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDA 156
            .:...|:.|..:....:|||.:||.:.|:.::|::.|::.|:.....||.:|||.|:||.:|||.
  Rat   133 GLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPRLAKGELLGCFGLTEPNHGSDP 197

  Fly   157 GAASTIA--TDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATKGFSLGK 219
            |:..|.|  ......:.|:|||.||||:..|:..:|:|    :.:...|..|::.|..:|.|..:
  Rat   198 GSMETRARHNPSNKSYTLSGTKTWITNSPVADLFVVWA----RCEDNCIRGFLLEKGMRGLSAPR 258

  Fly   220 KEDKLGIRGSSTCQLIFEDCVVPKENMLGEPG-----FGFKIAMQTLDAGRIGIAGQALGIGQAA 279
            .|.|..:|.|:|..:|.:...||:||:|....     ||      .|:..|.||....||..:..
  Rat   259 IEGKFSLRASATGMIIMDSVEVPEENVLPNVSSLAGPFG------CLNTARYGITWGVLGAAEFC 317

  Fly   280 LELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLA 344
            |..|..||..|..||.|:|:.|.:|:|:|||...:........:...||||.:...:..::.|..
  Rat   318 LHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATPEMVSLLKRN 382

  Fly   345 ASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEG 386
            ....|...:.|...||||.|...:....||..:......|||
  Rat   383 NCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEG 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	107/365 (29%)
Gcdh	XP_063134240.1	None