DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and ACADM

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001272972.1 Gene:ACADM / 34 HGNCID:89 Length:454 Species:Homo sapiens


Alignment Length:413 Identity:149/413 - (36%)
Similarity:217/413 - (52%) Gaps:39/413 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 SETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPE------------- 79
            :|..:..|.:.|.||..|:...||::|:...||...||:..|||:|...|||             
Human    42 TEQQKEFQATARKFAREEIIPVAAEYDKTGEYPVPLIRRAWELGLMNTHIPENCDYSVCPLLEAC 106

  Fly    80 --------------------ELGGTGLDYVAYAIAMEEISRGCASAGVIMSV-NNSLYLGPLLSF 123
                                .|||.||......:..||::.||  .||..:: .|||...|::..
Human   107 TLYLDAFFLLLTGSNLNLHLNLGGLGLGTFDACLISEELAYGC--TGVQTAIEGNSLGQMPIIIA 169

  Fly   124 GNDAQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAA 188
            |||.|||.|:...|....:..:.::|||.|||.....|.|..|||.:::||.|.||||..:|...
Human   170 GNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWY 234

  Fly   189 IVFATTNKQLK---HKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEP 250
            .:.|.::...|   :|..:.|||...|.|..:|:||..:|.|.|.|..::|||..|||||:|...
Human   235 FLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGD 299

  Fly   251 GFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315
            |.|||:||...|..|..:|..|:|:.|.||:.|..||.:|:.|||.:.:.|:|...:|:|::.:|
Human   300 GAGFKVAMGAFDKTRPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVE 364

  Fly   316 SARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARI 380
            .||:...||||..|..:..|..|::||..|.:.|...:...:|||||.|:.|:...|:..|||:|
Human   365 LARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKI 429

  Fly   381 TEIYEGTSEIQRLVIAGSILKEY 403
            .:||||||:||||::|...:.:|
Human   430 YQIYEGTSQIQRLIVAREHIDKY 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 148/408 (36%)
ACADMNP_001272972.1 MCAD 41..451 CDD:173846 148/410 (36%)

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