Protein Alignment Arc42 and Gcdh

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_032123.3
• Gene: Gcdh / 270076
• MGIID: 104541
• Length: 447
• Species: Mus musculus
• Alignment Length: 380
• Identity: 115/380 - (30%)
• Similarity: 183/380 - (48%)
• Gaps: 18/380 - (4%)

  Fly    27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAY 91
            |:...::::.:.|::....|.......:|..::....:.:||||||:...| :..|..|:..|||
Mouse    69 LTADEKLIRDTFRNYCQERLMSRILLANRNEVFHRDIVYEMGELGVLGPTI-KGYGCAGVSSVAY 132

  Fly    92 AIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDA 156
            .:...|:.|..:....:|||.:||.:.|:.::|::.|::.|:.....||.:|||.|:||.:|||.
Mouse   133 GLLTRELERVDSGYRSMMSVQSSLVMHPIYTYGSEEQRQKYLPGLAKGELLGCFGLTEPNHGSDP 197

  Fly   157 GAASTIA--TDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATKGFSLGK 219
            |...|.|  ......:.|:|||.||||:..|:..||:|    :.:...|..||:.|..:|.|..:
Mouse   198 GGMETRARHNPSNQSYTLSGTKTWITNSPVADLFIVWA----RCEDNCIRGFILEKGMRGLSAPR 258

  Fly   220 KEDKLGIRGSSTCQLIFEDCVVPKENMLGEPG-----FGFKIAMQTLDAGRIGIAGQALGIGQAA 279
            .|.|..:|.|:|..:|.:...||:||:|....     ||      .|:..|.||....||..:..
Mouse   259 IEGKFSLRASATGMIIMDSVEVPEENVLPNVSSLAGPFG------CLNTARYGITWGVLGAAEFC 317

  Fly   280 LELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLA 344
            |..|..||..|..||.|:|:.|.:|:|:|||...:........:...||||.:...:..:|.|..
Mouse   318 LHTARQYALDRIQFGVPLARNQLVQKKLADMLTEITLGLHACLQLGRLKDQDKATPEMVSMLKRN 382

  Fly   345 ASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSI 399
            ....|...:.|...||||.|...:....||..:......||||.:|..|::..:|
Mouse   383 NCGKALDIARQARDILGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAI 437

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	114/378 (30%)
Gcdh	NP_032123.3	GCD	57..443	CDD:173840	115/380 (30%)