Protein Alignment Arc42 and Acadl

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_036951.1
• Gene: Acadl / 25287
• RGDID: 2011
• Length: 430
• Species: Rattus norvegicus
• Alignment Length: 378
• Identity: 121/378 - (32%)
• Similarity: 203/378 - (53%)
• Gaps: 5/378 - (1%)

  Fly    28 SETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAYA 92
            |..|.:.::|.|.|...|:.....::::......:...:.|:.|::.:.|.|:.||.|.|.::.|
  Rat    54 SSEHDIFRESVRKFFQEEVIPYHEEWEKAGEVSRELWEKAGKQGLLGINIAEKHGGIGGDLLSTA 118

  Fly    93 IAMEEIS-RGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDA 156
            :..||.: ..|...|  .|:::.:.:..:.::|...|.:.:|...|.|:.:|..|::|||.|||.
  Rat   119 VTWEEQAYSNCTGPG--FSLHSDIVMPYIANYGTKEQIEQFIPQMTAGKCIGAIAMTEPGAGSDL 181

  Fly   157 GAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKH--KGISAFIVPKATKGFSLGK 219
            ....|.|...|..::|||:|.:|||.:.::..||.|.||::.:.  .|||.|:|....|||..||
  Rat   182 QGVRTNAKRSGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSPAHGISLFLVENGMKGFIKGK 246

  Fly   220 KEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAV 284
            |..|:|::...|.:|.|||..:|...:|||...||...||.|...|:.||..|:...:...|...
  Rat   247 KLHKMGMKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIADLAISACEFMFEETR 311

  Fly   285 DYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAA 349
            :|.::|:||||.:|.:|::|.|:|::...:...|........|.:.|:..:..|:|||..|||..
  Rat   312 NYVRQRKAFGKTVAHIQTVQHKLAELKTNICVTRAFVDSCLQLHETKRLDSASASMAKYWASELQ 376

  Fly   350 TLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKE 402
            ...::||:|:.||.||:.:....:.|.|||:..||.||:||.:.:||..|:.:
  Rat   377 NTVAYQCVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMKELIARQIVSD 429

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	120/374 (32%)
Acadl	NP_036951.1	LCAD	56..427	CDD:173849	119/372 (32%)