Protein Alignment Arc42 and Ivd

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_036724.1
• Gene: Ivd / 24513
• RGDID: 2936
• Length: 424
• Species: Rattus norvegicus
• Alignment Length: 378
• Identity: 149/378 - (39%)
• Similarity: 220/378 - (58%)
• Gaps: 8/378 - (2%)

  Fly    24 LSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIR----QMGELGVMAVAIPEELGGT 84
            ::.|:|..:.|:.:...|....|:..|.:.|:.:.:  |.:|    |:|.|||:.:..|.:.||:
  Rat    40 INGLNEEQKQLRHTISKFVQENLAPKAQEIDQSNDF--KNLREFWKQLGSLGVLGITAPVQYGGS 102

  Fly    85 GLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSE 149
            ||.|:.:.:.||||||..|:.|:....:::|.:..::..||:|||:.|:....:||.:|..|:||
  Rat   103 GLGYLEHVLVMEEISRASAAVGLSYGAHSNLCINQIVRNGNEAQKEKYLPKLISGEFIGALAMSE 167

  Fly   150 PGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQL--KHKGISAFIVPKAT 212
            |..|||..:....|..||||:||||.|.||||..:|:..:|:|.|:...  ..:||:||||.|..
  Rat   168 PNAGSDVVSMRLKAEKKGDHYVLNGNKFWITNGPDADVLVVYAKTDLTAVPASRGITAFIVEKDM 232

  Fly   213 KGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQ 277
            .|||..||.||||:|||:||:|:||||.||..|:|.:...|..:.|..||..|:.:||..|||.|
  Rat   233 PGFSTSKKLDKLGMRGSNTCELVFEDCKVPAANILSQESKGVYVLMSGLDLERLVLAGGPLGIMQ 297

  Fly   278 AALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAK 342
            |.|:..:.|...|:|||:.|.:.|.:|.|:|||...:.:.|...:..|...|:.....|:.|...
  Rat   298 AVLDHTIPYLHVREAFGQKIGQFQLMQGKMADMYTRLMACRQYVYNVARACDEGHITAKDCAGVI 362

  Fly   343 LAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVI 395
            |..:|.||..:...||.|||.||:.|....|..|||::.||..||||::||||
  Rat   363 LYTAECATQVALDGIQCLGGNGYINDFPMGRFLRDAKLYEIGGGTSEVRRLVI 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	148/373 (40%)
Ivd	NP_036724.1	IVD	42..421	CDD:173845	149/376 (40%)