Protein Alignment Arc42 and Acadm

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_058682.2
• Gene: Acadm / 24158
• RGDID: 2012
• Length: 421
• Species: Rattus norvegicus
• Alignment Length: 381
• Identity: 148/381 - (38%)
• Similarity: 208/381 - (54%)
• Gaps: 6/381 - (1%)

  Fly    27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAY 91
            |:|..:..|...|.||..|:...|..:|:...||...|::..|||::...|||..||.||.....
  Rat    41 LTEQQKEFQTIARKFAREEIIPVAPDYDKSGEYPFPLIKRAWELGLINTHIPESCGGLGLGTFDA 105

  Fly    92 AIAMEEISRGCASAGVIMSVN-NSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSD 155
            .:..||::.||  .||..::. |||...|::..|||.|||.|:...|....:..:.::||..|||
  Rat   106 CLITEELAYGC--TGVQTAIEANSLGQMPVIIAGNDQQKKKYLGRMTEQLMMCAYCVTEPSAGSD 168

  Fly   156 AGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLK---HKGISAFIVPKATKGFSL 217
            .....|.|..|||.:|:||.|.||||..:|....|...:|...|   .|..:.|||...|.|..:
  Rat   169 VAGIKTKAEKKGDEYVINGQKMWITNGGKANWYFVLTRSNPDPKVPASKAFTGFIVEADTPGIHI 233

  Fly   218 GKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALEL 282
            ||||..:|.|.|.|..:.|||..|||||:|...|.||||||...|..|..:|..|:|:.|.||:.
  Rat   234 GKKELNMGQRCSDTRGITFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDE 298

  Fly   283 AVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASE 347
            |..||..|:.|||.:.:.|.:...:|:|::.:|.|||...||||..|..:..|..|::||..|.:
  Rat   299 ATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYFASIAKAFAGD 363

  Fly   348 AATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKEY 403
            .|...:...:||.||.|:.|:...|:..|||:|.:|||||::||||:||...:::|
  Rat   364 IANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEKY 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	146/375 (39%)
Acadm	NP_058682.2	MCAD	41..418	CDD:173846	147/378 (39%)