DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Acad9

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_766266.3 Gene:Acad9 / 229211 MGIID:1914272 Length:625 Species:Mus musculus


Alignment Length:404 Identity:160/404 - (39%)
Similarity:225/404 - (55%) Gaps:35/404 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LSETHQM---LQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDY 88
            |||.:|.   |:|    |...|:  ::.|.|:|...|...:.::..||:..:.:|||.||.||..
Mouse    68 LSEINQFVGPLEK----FFTEEV--DSRKIDQEGKIPVDTLEKLKSLGLFGIQVPEEYGGLGLSN 126

  Fly    89 VAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNG 153
            ..||...|.||.. ||..|.::.:.::.|..::..||:.||..|:...::||.:..|.|:||.:|
Mouse   127 TMYARLGEIISLD-ASITVTLAAHQAIGLKGIILVGNEEQKAKYLPKLSSGEHIAAFCLTEPASG 190

  Fly   154 SDAGAASTIATDKGD--HFVLNGTKAWITNAFEAEAAIVFATT----NKQLKHKGISAFIVPKAT 212
            |||.:..|.||...|  :|:|||:|.||||...|....|||.|    :...|...::||||.:..
Mouse   191 SDAASIQTRATLSEDKKYFILNGSKVWITNGGLANIFTVFAKTEVVDSDGSKTDKMTAFIVERDF 255

  Fly   213 KGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQ 277
            .|.:.||.|||||||||:||::.||:..||.||:|||.|.|||:||..|::||..:.....|:.:
Mouse   256 GGITNGKPEDKLGIRGSNTCEVHFENTRVPVENVLGEVGGGFKVAMNILNSGRFSMGSAVAGMLK 320

  Fly   278 AALELAVDYAQKRQAFGKPIAKLQSIQQKIADM---SLAMESARLLTWRAAWLKDQK--QPYTKE 337
            ..:||..:||..|:.|.:.:::...||:|.|.|   :..|||...||   :.:.||.  ...:.|
Mouse   321 KLIELTAEYACTRKQFNRNLSEFGLIQEKFALMAQKAYVMESMAYLT---SGMLDQPGFPDCSIE 382

  Fly   338 AAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVI------- 395
            |||.|:.:||||..|..:.:|||||.||:.|...||..|||||..|:|||:||.||.|       
Mouse   383 AAMVKVFSSEAAWQCVSEALQILGGSGYMKDYPYERMLRDARILLIFEGTNEILRLFIALTGLQH 447

  Fly   396 AGSIL----KEYAS 405
            ||.||    ||..|
Mouse   448 AGRILTSRIKELKS 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 155/396 (39%)
Acad9NP_766266.3 VLCAD 42..449 CDD:173850 153/390 (39%)

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