Protein Alignment Arc42 and acox-1.3

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_493263.1
• Gene: acox-1.3 / 184167
• WormBaseID: WBGene00008566
• Length: 660
• Species: Caenorhabditis elegans
• Alignment Length: 460
• Identity: 95/460 - (20%)
• Similarity: 165/460 - (35%)
• Gaps: 120/460 - (26%)

  Fly    12 ARRSLNARQIASLSALSET--------HQMLQKSCRDFANNELSGNAAKFDRE------HLYPEK 62
            :||......|:.:..|:|:        .:.:.:|||.........|...|:|:      |:|.|
 Worm    38 SRRRQLTESISRIHELAESKPLVFMTREEKIAESCRKLEVLSRHWNQTPFNRDNEEDALHIYRE- 101

  Fly    63 QIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDA 127
                                         .:.||         |..:::::::::..|::..:..
 Worm   102 -----------------------------VLGME---------GHPLALHDTMFIPTLVAQASQE 128

  Fly   128 QKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGD--HFVLN----GTKAWITNAF--E 184
            |::.::......|.:||:|.:|.|:|::.....|.||...|  .|:||    ....|...|.  .
 Worm   129 QQEKWLGRARRKEIIGCYAQTEMGHGTNLRKLETTATYSPDTQEFILNTPTITALKWWPGALGKS 193

  Fly   185 AEAAIVFATTNKQLKHKGISAFIVPK-------ATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVP 242
            :..|||.|....:.::.|...|:|..       ..||..:|....|:...|:....|.|.:..:|
 Worm   194 SNNAIVVANLLIKDQNYGPHPFMVQLRDEKTHIPLKGIVVGDIGPKMAFNGADNGYLGFNNHRIP 258

  Fly   243 KENMLG------------EPGFGFKIAMQTLDAGRIGIA-GQALGIGQAALELAVDY-AQKRQAF 293
            :.|:|.            :|... ||...::...|..:| .|.|.:. :||.:||.| |.:||.|
 Worm   259 RTNLLMRHTKVEANGTYIKPSHA-KIGYSSMVKVRSRMAMDQGLFLA-SALVIAVRYSAVRRQGF 321

  Fly   294 GKPIAKLQSIQQKIADMSLAMESARLLTWRA-----------------AWLKDQKQPYTKEAAMA 341
                  |:...||:..:....:..||....|                 ..|||.....|...|..
 Worm   322 ------LEDKTQKVKVLDYQTQQHRLFPSLARAYAFIFTGFETIHLYSQLLKDVDMGNTSGMADL 380

  Fly   342 KLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDAR-ITEI---------YEGTSEIQRLVIA 396
            ....|...::.:||..:   |:........|..|..|. |:||         |||.:.:..|.:|
 Worm   381 HALTSGLKSVVTHQTGE---GIEQARMACGEHGYSMASYISEIYGVAIGGCTYEGENMVMLLQLA 442

  Fly   397 GSILK 401
            ..::|
 Worm   443 RYLVK 447

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	90/441 (20%)
acox-1.3	NP_493263.1	ACAD	11..634	CDD:447864	95/460 (21%)