Protein Alignment Arc42 and acdh-6

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_498885.1
• Gene: acdh-6 / 182112
• WormBaseID: WBGene00015335
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 393
• Identity: 126/393 - (32%)
• Similarity: 196/393 - (49%)
• Gaps: 7/393 - (1%)

  Fly     6 TRSLCIARRSLNARQIASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQI-RQMGE 69
            |.||..|..|...:.:    ...|.|..:|.|.......:::.|.|::::...||...: :.:|:
 Worm     8 TSSLLPATTSSTVKHM----IYDEPHFAMQNSLAKLIKEKINPNVAQWEKSGRYPAHFVFKMLGQ 68

  Fly    70 LGVMAVAIPEELGGTGLDY-VAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYI 133
            |||.||..|.:.||||.|: ::.|||.:..:..|.|..:.:.|.:.:....|..||:|:.:..::
 Worm    69 LGVFAVNKPVDYGGTGRDFAMSIAIAEQIGAVDCGSIPMSVMVQSDMSTPALAQFGSDSLRNRFL 133

  Fly   134 TPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAE-AAIVFATTNKQ 197
            .|...|:.|...|:|||..|||..|..|.|...|...::||:|.||||..:|: |.::..|:|.:
 Worm   134 RPSINGDLVSSIAVSEPHAGSDVSAIRTHARRYGSDLIINGSKMWITNGDQADWACVLVNTSNAK 198

  Fly   198 LKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLD 262
            ..||..|...:|..:.|.......||||:|.|.|.||.|||..||...::||.|.||...|...:
 Worm   199 NLHKNKSLVCIPLDSIGVHRSTPLDKLGMRSSDTVQLFFEDVRVPSSYIIGEEGRGFAYQMNQFN 263

  Fly   263 AGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWL 327
            ..|:......|...|..:...::||::|..|||.:...|.:|.::|::...:|:.|.|.:|....
 Worm   264 DERLVTVAVGLLPLQKCINETIEYARERLIFGKTLLDQQYVQFRLAELEAELEATRSLLYRTVLA 328

  Fly   328 KDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQR 392
            :.|.:..:...|||||.....|...:.||:||.||.||:.|....|.:||.||..|..|..|:..
 Worm   329 RCQGEDVSMLTAMAKLKIGRLARKVTDQCLQIWGGAGYLNDNGISRAFRDFRIFSIGAGCDEVMM 393

  Fly   393 LVI 395
            .:|
 Worm   394 QII 396

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	121/370 (33%)
acdh-6	NP_498885.1	CaiA	25..396	CDD:441563	120/370 (32%)