DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and acdh-7

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_510789.1 Gene:acdh-7 / 181758 WormBaseID:WBGene00020812 Length:412 Species:Caenorhabditis elegans


Alignment Length:409 Identity:150/409 - (36%)
Similarity:225/409 - (55%) Gaps:10/409 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLTRSLCIARRSLNARQIASLSA----LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQI 64
            :|:|:|....|..:....|..:.    |:......:.:.|.|..:|:...|.::|:...||.:.|
 Worm     1 MLSRNLTKCTRLFSTTNKAMSTGMDFQLTADQAEFRANVRKFVADEVIPVAGEYDKTMEYPWEII 65

  Fly    65 RQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCAS-AGVIMSVNNSLYLGPLLSFGNDAQ 128
            ::....|.:...|||..||.|:|.|:..|..||::.||:. |..||:  |.|.|.||:...||..
 Worm    66 KKAHAQGYLIADIPEAYGGLGVDMVSNCIISEEMAYGCSGIATAIMA--NDLALTPLILCANDDI 128

  Fly   129 KKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFAT 193
            ||.::........|..:|::|||.|||.....|....|||.::|||:|.|||||..|....|.|.
 Worm   129 KKRFLGRMIDNPFVASYAVTEPGAGSDVAGVKTKCEKKGDEYILNGSKMWITNAGHANWFFVLAR 193

  Fly   194 TN---KQLKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFK 255
            ::   |....|..:||:|...|.|.:.|:||..:|.|.|.|..:.|||..||..|::|.||.|||
 Worm   194 SDPDPKTAAGKAFTAFVVEGDTPGLTRGRKEINMGQRCSDTRGITFEDVRVPAANVVGAPGEGFK 258

  Fly   256 IAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLL 320
            :||:|.|..|..:|..|.|:....|::|..|:.:|:|||..||..|.:...:|:|::..|.|||:
 Worm   259 VAMKTFDKTRPTVAALATGVAYRCLDVATQYSLERKAFGTQIANHQGVSFLLAEMAINCELARLM 323

  Fly   321 TWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYE 385
            |:::....|..:|.:..|::|||.||:.|...:...:||.||.|:.|:..||:..|||:|.:|||
 Worm   324 TYKSGAEVDAGRPGSYYASIAKLFASDTANQAATNAVQIFGGAGFNTEYPAEKLMRDAKIFQIYE 388

  Fly   386 GTSEIQRLVIAGSILKEYA 404
            |||:|||:|||..:|...|
 Worm   389 GTSQIQRMVIARQLLARVA 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 142/375 (38%)
acdh-7NP_510789.1 ACAD 28..405 CDD:447864 144/378 (38%)

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