Protein Alignment Arc42 and acdh-13

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_501452.1
• Gene: acdh-13 / 177654
• WormBaseID: WBGene00001566
• Length: 617
• Species: Caenorhabditis elegans
• Alignment Length: 372
• Identity: 84/372 - (22%)
• Similarity: 154/372 - (41%)
• Gaps: 87/372 - (23%)

  Fly     7 RSLCIARRSLNARQIASLS--------ALSETHQMLQKS-CRDFANNELSGNAAKFDREH-LYPE 61
            |.|..|.:|   :::|.:|        .|..|..:.::| .|.||.|       ||:::. :|||
 Worm    17 RCLSDAAKS---KEVAGISEKSKFAIRTLDNTSSIEKRSLSRGFAMN-------KFEKDFMIYPE 71

  Fly    62 ---------------------------KQIRQMGEL-----------GVMAVAIPEELGGTGLDY 88
                                       |.|.:.|:|           .:.::||.:...|.|:..
 Worm    72 YTDSDDVRNIEGFVDVLRKSLELSVDSKLIEKEGKLASDTIEALRSNAIFSLAIGKYFDGIGMCN 136

  Fly    89 VAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLS-FGNDAQKKDYITPFTTGERVGCFALSEPGN 152
            ...:...||:|   ....|..:.:.||.:..:|: :|:|.||..|:....:|:.....|:.:..|
 Worm   137 KDLSKVFEELS---VDWNVYTTSHISLLVANILTIYGSDEQKSKYLGILGSGKLRPAVAIVKDTN 198

  Fly   153 GSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATKG--- 214
            |   |.....| ..|...:|||....:.....|...:||...|.:.     :.|::.:|..|
 Worm   199 G---GVCEQTA-GPGGKSMLNGQNIRVMGHHNANFYVVFGNNNGEK-----TCFLLDEAELGTTD 254

  Fly   215 ---FSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIG 276
               |:   :::.:|::|....::.....|..| |:||.||.|.:||.:.:.:||:..|...:|:.
 Worm   255 KIQFT---RDETIGLKGIDVGRIELTALVTDK-NLLGTPGHGSEIASELVGSGRMPFAAATIGMA 315

  Fly   277 QAAL-ELAV--DYAQKRQAFGKPIAKLQSIQQKIADMSL---AMESA 317
            :.|| ||::  :....||.....:|.....|:.:.:::|   |:||:
 Worm   316 RRALRELSIWCNRTPSRQNDRTTLADDSRSQRIVTELALKVYALESS 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	77/342 (23%)
acdh-13	NP_501452.1	ACAD	57..434	CDD:447864	74/329 (22%)