Protein Alignment Arc42 and ivd-1

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_500720.1
• Gene: ivd-1 / 177281
• WormBaseID: WBGene00015326
• Length: 419
• Species: Caenorhabditis elegans
• Alignment Length: 407
• Identity: 151/407 - (37%)
• Similarity: 241/407 - (59%)
• Gaps: 19/407 - (4%)

  Fly    14 RSLNARQIASLSA---------LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIR---- 65
            |:|.::.:...||         |::....|::|.|.||:.||:..|.|.|:::.:  .|:|
 Worm    17 RALQSQAVRQFSAYPIDDSMFGLNDEEIALRQSIRQFADKELAPYADKIDKDNGW--DQLRPFWK 79

  Fly    66 QMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMS--VNNSLYLGPLLSFGNDAQ 128
            ::|:.|::.:..|.|.||:|::|.::.|||||:||  |:.|:.:|  .:::|.:..::..|::.|
 Worm    80 KLGDQGLLGITAPAEYGGSGMNYFSHVIAMEELSR--AAGGIALSYGAHSNLCINQIVRNGSEEQ 142

  Fly   129 KKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFAT 193
            :|.|:....:||.:|..|:||...|||..:....|..|||.:||||||.||||..:|:..:|:|.
 Worm   143 RKKYLPKLISGEHMGALAMSEAQAGSDVVSMKLRAEKKGDKYVLNGTKFWITNGPDADVLVVYAK 207

  Fly   194 TNKQLKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAM 258
            |:......||:.|:|.|.|.|||...|.||||:|||:||:|:|::|.:.:..::|..|.|..:.|
 Worm   208 TDPSKHQHGITCFLVEKNTPGFSQSPKLDKLGMRGSNTCELVFDNCEIHESQIMGGKGKGVYVLM 272

  Fly   259 QTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWR 323
            ..||..|:.::|..||:.|||.::|.|||.:|.|||:.|...|.:|.|:|||...:.::|...:.
 Worm   273 TGLDYERLVLSGGPLGLMQAACDIAFDYAHQRTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYM 337

  Fly   324 AAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTS 388
            .|...|:.....|:.|...|..:|..|......||||||.||:.|..|.|..|||::.||..|||
 Worm   338 VAKAADKGNVSNKDCAGVILYVAEKCTQVCLDAIQILGGNGYINDYPAGRLLRDAKLYEIGAGTS 402

  Fly   389 EIQRLVIAGSILKEYAS 405
            |::||:|..::.|||::
 Worm   403 EVRRLIIGRALNKEYSN 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	143/377 (38%)
ivd-1	NP_500720.1	IVD	38..415	CDD:173845	144/380 (38%)