Protein Alignment Arc42 and acdh-2

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001343623.1
• Gene: acdh-2 / 173940
• WormBaseID: WBGene00015894
• Length: 386
• Species: Caenorhabditis elegans
• Alignment Length: 393
• Identity: 132/393 - (33%)
• Similarity: 217/393 - (55%)
• Gaps: 35/393 - (8%)

  Fly    15 SLNARQ---IASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVA 76
            |::|:|   :..|..|:|..:.|.:..::||.:.:.....:.||:....::.:::..:|.:|.:.
 Worm    21 SISAQQQPRVFPLQHLNENEKKLVEKVKNFAQSSVKPLVREMDRDARINKQLLKKAFDLKLMGLK 85

  Fly    77 IPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLL-SFGNDAQKKDYITPFTTGE 140
            |..:.||:|:.:....:|:||:|:...:..:||.:.|:| :.||: .|||:..|:.|:..... :
 Worm    86 IDPKYGGSGVSFFELVLAVEELSKIDPAIALIMHLQNAL-VAPLIEEFGNEELKEKYLKKLCK-D 148

  Fly   141 RVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISA 205
            .||.|||||..:||||.|..|:|...||||:|||:|..|:||..|:..:|.|..:.:..::|::.
 Worm   149 SVGAFALSEVVSGSDAFAMQTVAKKDGDHFILNGSKWGISNAPIADFFLVLANADPEKGYRGVTC 213

  Fly   206 FIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAG 270
            |||.:..:|..||:::|.||:|..:..|:......|||.:::||.|.|:|.|::.|:|.||.|..
 Worm   214 FIVDRDHEGVVLGEQDDNLGMRAGTIAQVHLNSVRVPKTSIVGEYGKGYKYAIEVLNASRIVIGA 278

  Fly   271 QALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYT 335
            |                             ..:|.:||.:...:|:|||:.:..|.:||...|:.
 Worm   279 Q-----------------------------MGLQHQIAKIQTEIEAARLMVYNCARMKDCGMPFV 314

  Fly   336 KEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSIL 400
            |||:|||..|.|.|...:.|||:.|||:|:..:..||:.||||.:..||||||.||...||..|.
 Worm   315 KEASMAKYYAPEVACKTTKQCIEWLGGVGFTKNFMAEKFYRDAVVGGIYEGTSNIQLNTIAKFID 379

  Fly   401 KEY 403
            .|:
 Worm   380 NEF 382

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	126/372 (34%)
acdh-2	NP_001343623.1	ACAD	38..379	CDD:447864	125/371 (34%)