Protein Alignment Arc42 and acdh-9

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_493832.1
• Gene: acdh-9 / 173466
• WormBaseID: WBGene00017874
• Length: 409
• Species: Caenorhabditis elegans
• Alignment Length: 412
• Identity: 137/412 - (33%)
• Similarity: 229/412 - (55%)
• Gaps: 25/412 - (6%)

  Fly     1 MQSVLTRSLCIARRSLNARQIASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIR 65
            :::||::.|.:  |:.::..:.....|....:.:.::...||..|:....|.:|::...|...:|
 Worm     3 LRNVLSKGLRL--RNSSSYCLRPGVGLERDVEDVLEAAHQFAKKEMYPKMADWDKQGELPMDVLR 65

  Fly    66 QMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKK 130
            :.||:|..|:....:.||:||..:..::..|::|.||.|....:|::| :....|.::|.:..|:
 Worm    66 KAGEMGFGAIYCSGDHGGSGLSRLHASVIFEQLSMGCVSTAAYISIHN-MCAWMLDTYGPEKLKE 129

  Fly   131 DYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTN 195
            |.:......:::|.:.|:||..||||.:..|.||.|||::|:||:||:|:.|         .|:|
 Worm   130 DLLPDMAVFKKLGSYCLTEPDAGSDAASIRTTATKKGDYYVVNGSKAFISGA---------GTSN 185

  Fly   196 KQL----------KHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEP 250
            ...          ..|||...::...|:|||.||||||||.....|..|.||||.||..|.:|:.
 Worm   186 NYFVMMRQDGAAPGAKGIFCLMIEDGTEGFSYGKKEDKLGWNSQPTRILTFEDCKVPITNQIGKD 250

  Fly   251 GFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAME 315
            ||||.|||..|:.|||.||..:||..|.:::||:::.:.|:.|||.:|..|..|.|:|:::..:.
 Worm   251 GFGFNIAMAGLNGGRINIASCSLGAAQRSMDLAIEHLKYRKQFGKSLADFQYNQFKLAELATKLY 315

  Fly   316 SARLLTWRAAWLKDQKQPYTKEA--AMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDA 378
            ::||:...||...|...| .|.|  |||||.|::......:..:|:.||.|::.|...:::.||.
 Worm   316 TSRLIVRNAAEQLDNDDP-EKVALCAMAKLHATDNCFDVVNGALQMFGGYGFLKDYPVQQYLRDI 379

  Fly   379 RITEIYEGTSEIQRLVIAGSIL 400
            |:.:|.|||:|:.||:|:..:|
 Worm   380 RVHQILEGTNEMMRLLISRDLL 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	132/384 (34%)
acdh-9	NP_493832.1	IBD	27..403	CDD:173851	133/386 (34%)