Protein Alignment Arc42 and acdh-4

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001300435.1
• Gene: acdh-4 / 172367
• WormBaseID: WBGene00020419
• Length: 385
• Species: Caenorhabditis elegans
• Alignment Length: 323
• Identity: 136/323 - (42%)
• Similarity: 196/323 - (60%)
• Gaps: 1/323 - (0%)

  Fly    24 LSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDY 88
            |..|||......|:.|.||:..:.....:.||........|....|.|:|.:.:||:.||.|..:
 Worm    38 LQVLSEQETGFVKTVRQFADTVIKPLVREMDRTSEMTPAVINGCFENGLMGIEVPEKYGGPGATF 102

  Fly    89 VAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNG 153
            ...|:.:||||:..||.|.::.|:|:|::..::..|.:.||:.|:....|.. ||.|||||.|:|
 Worm   103 FDAALVIEEISKVDASVGAMVDVHNTLFIPLIIELGTEKQKEKYLPKCYTSS-VGSFALSETGSG 166

  Fly   154 SDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPKATKGFSLG 218
            |||.|..|.|...||.:|:||:|.||:|:.::|..:|||..:....:|||:.|||.|.||||::|
 Worm   167 SDAFALKTTAKKDGDDYVINGSKMWISNSEQSETFLVFANADPSKGYKGITCFIVEKGTKGFTIG 231

  Fly   219 KKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELA 283
            |.|||||:|.||||.|.|::..|.|..:|||.|.|:|.|::.|:||||||..|.||:.|...:..
 Worm   232 KHEDKLGVRSSSTCPLHFDNVRVHKSAILGEFGKGYKYAIEYLNAGRIGIGAQMLGLAQGCFDQT 296

  Fly   284 VDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAAS 346
            :.|.|:|:.||:.|...|.:|.:||.:...:|:||||.:.||.:|....|:.:|||||||.||
 Worm   297 IPYLQQREQFGQRIIDFQGMQHQIAQVRTEIEAARLLVYNAARMKQHGLPFVREAAMAKLFAS 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	133/318 (42%)
acdh-4	NP_001300435.1	ACAD	43..359	CDD:447864	131/316 (41%)