DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Arc42

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_321112.6 Gene:Arc42 / 1281174 VectorBaseID:AGAMI1_013418 Length:404 Species:Anopheles gambiae


Alignment Length:387 Identity:311/387 - (80%)
Similarity:348/387 - (89%) Gaps:0/387 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LNARQIASLSALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEE 80
            :.:|.|||||||.:|||||||:|||||:|||..|||:||||||||.:|||:|||||:||:::.||
Mosquito    15 VRSRSIASLSALPDTHQMLQKTCRDFADNELVPNAARFDREHLYPAEQIRKMGELGLMAISVKEE 79

  Fly    81 LGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCF 145
            .|||||||||||||||||||||||||||||||||||||||..|||:.|::.|:..:|.|.|||||
Mosquito    80 YGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLTHFGNEQQQQKYVAEYTDGSRVGCF 144

  Fly   146 ALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLKHKGISAFIVPK 210
            ||||||||||||||||.||.||||:||||||.||||.:||.||:|||||:|.|||||||||||||
Mosquito   145 ALSEPGNGSDAGAASTTATLKGDHWVLNGTKCWITNGYEAGAAVVFATTDKSLKHKGISAFIVPK 209

  Fly   211 ATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGI 275
            .|.|||||||||||||||||||.||||||.:|:||:|||||||||||||||||||||||.|||||
Mosquito   210 ETPGFSLGKKEDKLGIRGSSTCSLIFEDCAIPRENLLGEPGFGFKIAMQTLDAGRIGIASQALGI 274

  Fly   276 GQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAM 340
            .||:||.|||||.||.||||||||||:||.|||||:..:|:|||||||||||||.|:|:|||||.
Mosquito   275 AQASLECAVDYANKRIAFGKPIAKLQAIQTKIADMATRLEAARLLTWRAAWLKDNKKPFTKEAAQ 339

  Fly   341 AKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKE 402
            ||||||||||.|:||.||:|||||||:||.|||||||||||||||||||||||||||:::||
Mosquito   340 AKLAASEAATYCAHQSIQVLGGMGYVSDMPAERHYRDARITEIYEGTSEIQRLVIAGAVIKE 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 301/371 (81%)
Arc42XP_321112.6 None

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