DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and LOC1270283

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_308965.3 Gene:LOC1270283 / 1270283 VectorBaseID:AGAMI1_014501 Length:429 Species:Anopheles gambiae


Alignment Length:424 Identity:156/424 - (36%)
Similarity:230/424 - (54%) Gaps:27/424 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RSLCIARRSLNARQIAS------------------------LSALSETHQMLQKSCRDFANNELS 47
            |:|..|.|.|:||...|                        |..|:|..|.|:::..:||..||:
Mosquito     5 RNLTTAARFLSARLAPSQARSWGGSFVVPARSMQHYPIDEYLFGLTEDQQQLRQTVFNFAQKELA 69

  Fly    48 GNAAKFDREHLYPEKQI--RQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMS 110
            ..|.:.|:::.:.|.:.  |::||:||:.|.:..|.||.|..|:.:.|..||:||...|..:...
Mosquito    70 PLAQEIDKQNEFKEMRSFWRKLGEMGVLGVTVKPEYGGLGGSYLDHCIVNEELSRASGSVALSYG 134

  Fly   111 VNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGT 175
            .:::|.:..:...|.|.||:.|:....:||.:|..|:||.|:|||..:....|...||::||||:
Mosquito   135 AHSNLCVNQIHRHGTDEQKERYLPKLCSGEHIGALAMSEAGSGSDVVSMKLRADKHGDYYVLNGS 199

  Fly   176 KAWITNAFEAEAAIVFATTNKQLK-HKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDC 239
            |.||||...|:..:::|.|:...| ..||:||||.:.|.||:.|.|.||||||||.|.:|||||.
Mosquito   200 KFWITNGPVADTYVIYAKTDTSAKPQHGITAFIVERGTAGFTQGPKLDKLGIRGSPTGELIFEDA 264

  Fly   240 VVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQ 304
            .||..|:||....|..:.|..||..|:.:|...:|:.|||.::|.:||..|:.|...|.:.|.:|
Mosquito   265 KVPAGNILGGLNKGVYVLMSGLDLERLVLAAGPVGLMQAACDVAFEYAHSRKQFNTRIGEFQLLQ 329

  Fly   305 QKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDM 369
            .|:|||...|.:.|...:..|...|:.|...|:.|...|..:|.||..:...||||||.||:.|.
Mosquito   330 GKMADMYTTMNACRAYLYSVARACDRGQANPKDCAGVILYCAEKATQVALDAIQILGGNGYINDY 394

  Fly   370 AAERHYRDARITEIYEGTSEIQRLVIAGSILKEY 403
            ...|..||.::.||..|||||:|::|..::.|||
Mosquito   395 PTGRIMRDCKLYEIGAGTSEIRRMLIGRALNKEY 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 143/374 (38%)
LOC1270283XP_308965.3 IVD 48..426 CDD:173845 144/377 (38%)

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