DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Acads

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_031409.2 Gene:Acads / 11409 MGIID:87868 Length:412 Species:Mus musculus


Alignment Length:409 Identity:280/409 - (68%)
Similarity:336/409 - (82%) Gaps:6/409 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SVLTRSLCIARRSLNARQIASLSA------LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPE 61
            ::|.|:....||:|..|....|..      |.||||||:::|||||..||...||:.|||||:|.
Mouse     4 ALLARARGPLRRALGVRDWRRLHTVYQSVELPETHQMLRQTCRDFAEKELVPIAAQLDREHLFPT 68

  Fly    62 KQIRQMGELGVMAVAIPEELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGND 126
            .|:::|||||::|:.:||||.|.||||:||:||:|||||.|||.||||||||||||||:|.||:.
Mouse    69 AQVKKMGELGLLAMDVPEELSGAGLDYLAYSIALEEISRACASTGVIMSVNNSLYLGPILKFGSA 133

  Fly   127 AQKKDYITPFTTGERVGCFALSEPGNGSDAGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVF 191
            .||:.:|||||.|:::|||||||||||||||||||.|.::||.:|||||||||||::||.|.:||
Mouse   134 QQKQQWITPFTNGDKIGCFALSEPGNGSDAGAASTTAREEGDSWVLNGTKAWITNSWEASATVVF 198

  Fly   192 ATTNKQLKHKGISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKI 256
            |:|::..::||||||:||..|.|.:|||||||||||.|||..||||||.:||||:|||||.||||
Mouse   199 ASTDRSRQNKGISAFLVPMPTPGLTLGKKEDKLGIRASSTANLIFEDCRIPKENLLGEPGMGFKI 263

  Fly   257 AMQTLDAGRIGIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLT 321
            ||||||.||||||.|||||.||:|:.||.||:.|.|||.|:.|||:||.|:|||:||:|||||||
Mouse   264 AMQTLDMGRIGIASQALGIAQASLDCAVKYAENRNAFGAPLTKLQNIQFKLADMALALESARLLT 328

  Fly   322 WRAAWLKDQKQPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEG 386
            ||||.|||.|:|:|||:||||||||||||..|||.|||||||||||:|.|||:||||||||||||
Mouse   329 WRAAMLKDNKKPFTKESAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERYYRDARITEIYEG 393

  Fly   387 TSEIQRLVIAGSILKEYAS 405
            |||||||||||.:|:.|.|
Mouse   394 TSEIQRLVIAGHLLRSYRS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 269/371 (73%)
AcadsNP_031409.2 SCAD_SBCAD 36..408 CDD:173847 269/371 (73%)

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