DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arc42 and Acadvl

DIOPT Version :10

Sequence 1:NP_650840.1 Gene:Arc42 / 42364 FlyBaseID:FBgn0038742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_059062.1 Gene:Acadvl / 11370 MGIID:895149 Length:656 Species:Mus musculus


Alignment Length:391 Identity:133/391 - (34%)
Similarity:204/391 - (52%) Gaps:28/391 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SALSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQ----------IRQMGELGVMAVAIPE 79
            |.|||......|        ||.|..|:|..|...|.|.          ::.:.|||...:.:|.
Mouse    93 SVLSEEQAQFLK--------ELVGPVARFFEEVNDPAKNDALEKVEDDTLQGLKELGAFGLQVPS 149

  Fly    80 ELGGTGLDYVAYAIAMEEISRGCASAGVIMSVNNSLYLGPLLSFGNDAQKKDYITPFTTGERVGC 144
            ||||.||....||...|.:........|.:..:.|:....:|.:|..||::.|:....:|:.:..
Mouse   150 ELGGLGLSNTQYARLAEIVGMHDLGVSVTLGAHQSIGFKGILLYGTKAQREKYLPRVASGQALAA 214

  Fly   145 FALSEPGNGSDAGA--ASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATT------NKQLKHK 201
            |.|:||.:|||..:  :|.|.:..|.::.|||:|.||:|...|:...|||.|      ...:|.|
Mouse   215 FCLTEPSSGSDVASIRSSAIPSPCGKYYTLNGSKIWISNGGLADIFTVFAKTPIKDAATGAVKEK 279

  Fly   202 GISAFIVPKATKGFSLGKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRI 266
             |:||:|.::..|.:.|..|.|:||:.|:|.::.|:...||.||:|||.|.|||:|:..|:.||.
Mouse   280 -ITAFVVERSFGGVTHGLPEKKMGIKASNTSEVYFDGVKVPSENVLGEVGDGFKVAVNILNNGRF 343

  Fly   267 GIAGQALGIGQAALELAVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQK 331
            |:|....|..::.:..|||:|..|..||..|.....||:|:|.|::.......:.:..:...||.
Mouse   344 GMAATLAGTMKSLIAKAVDHATNRTQFGDKIHNFGVIQEKLARMAILQYVTESMAYMLSANMDQG 408

  Fly   332 -QPYTKEAAMAKLAASEAATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVI 395
             :.:..|||::|:..||||...:.:||||:||||::.:...||..||.||..|:||.::|.||.:
Mouse   409 FKDFQIEAAISKIFCSEAAWKVADECIQIMGGMGFMKEPGVERVLRDIRIFRIFEGANDILRLFV 473

  Fly   396 A 396
            |
Mouse   474 A 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arc42NP_650840.1 SCAD_SBCAD 29..401 CDD:173847 130/387 (34%)
AcadvlNP_059062.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
Catalytic. /evidence=ECO:0000250|UniProtKB:P49748 42..483 133/391 (34%)
VLCAD 73..482 CDD:173850 133/391 (34%)
Membrane-anchoring. /evidence=ECO:0000250|UniProtKB:P49748 484..517
Blue background indicates that the domain is not in the aligned region.

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