Protein Alignment Arc42 and Acadm

DIOPT Version :10

• Sequence 1: NP_650840.1
• Gene: Arc42 / 42364
• FlyBaseID: FBgn0038742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_031408.1
• Gene: Acadm / 11364
• MGIID: 87867
• Length: 421
• Species: Mus musculus
• Alignment Length: 381
• Identity: 149/381 - (39%)
• Similarity: 212/381 - (55%)
• Gaps: 6/381 - (1%)

  Fly    27 LSETHQMLQKSCRDFANNELSGNAAKFDREHLYPEKQIRQMGELGVMAVAIPEELGGTGLDYVAY 91
            |:|..:..|.:.|.||..|:...|.::|:...||...|::..|||::...|||..||.||.....
Mouse    41 LTEQQKEFQATARKFAREEIIPVAPEYDKSGEYPFPLIKRAWELGLINAHIPESCGGLGLGTFDA 105

  Fly    92 AIAMEEISRGCASAGVIMSVN-NSLYLGPLLSFGNDAQKKDYITPFTTGERVGCFALSEPGNGSD 155
            .:..||::.||  .||..::. |||...|::..|||.|||.|:...|....:..:.::||..|||
Mouse   106 CLITEELAYGC--TGVQTAIEANSLGQMPVILAGNDQQKKKYLGRMTEQPMMCAYCVTEPSAGSD 168

  Fly   156 AGAASTIATDKGDHFVLNGTKAWITNAFEAEAAIVFATTNKQLK---HKGISAFIVPKATKGFSL 217
            ..|..|.|..|||.:|:||.|.||||..:|....:.|.:|...|   .|..:.|||...|.|..:
Mouse   169 VAAIKTKAEKKGDEYVINGQKMWITNGGKANWYFLLARSNPDPKVPASKAFTGFIVEADTPGIHI 233

  Fly   218 GKKEDKLGIRGSSTCQLIFEDCVVPKENMLGEPGFGFKIAMQTLDAGRIGIAGQALGIGQAALEL 282
            ||||..:|.|.|.|..:.|||..|||||:|...|.||||||...|..|..:|..|:|:.|.||:.
Mouse   234 GKKELNMGQRCSDTRGIAFEDVRVPKENVLIGEGAGFKIAMGAFDRTRPTVAAGAVGLAQRALDE 298

  Fly   283 AVDYAQKRQAFGKPIAKLQSIQQKIADMSLAMESARLLTWRAAWLKDQKQPYTKEAAMAKLAASE 347
            |..||..|:.|||.:.:.|.:...:|:|::.:|.|||...||||..|..:..|..|::||..|.:
Mouse   299 ATKYALDRKTFGKLLVEHQGVSFLLAEMAMKVELARLSYQRAAWEVDSGRRNTYYASIAKAFAGD 363

  Fly   348 AATLCSHQCIQILGGMGYVTDMAAERHYRDARITEIYEGTSEIQRLVIAGSILKEY 403
            .|...:...:||.||.|:.|:...|:..|||:|.:|||||::||||:||...:::|
Mouse   364 IANQLATDAVQIFGGYGFNTEYPVEKLMRDAKIYQIYEGTAQIQRLIIAREHIEKY 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Arc42	NP_650840.1	SCAD_SBCAD	29..401	CDD:173847	147/375 (39%)
Acadm	NP_031408.1	MCAD	41..418	CDD:173846	148/378 (39%)