DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and YKR104W

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_013030.1 Gene:YKR104W / 853979 SGDID:S000001812 Length:306 Species:Saccharomyces cerevisiae


Alignment Length:310 Identity:129/310 - (41%)
Similarity:192/310 - (61%) Gaps:33/310 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1040 MTAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIVFDDLSLKYFP--DKAADYVLRSLNIAI 1102
            |::|||:.||.|:..    ||.....||.:||:.|.:...:|||:|.|  .||.|    :::..:
Yeast     1 MSSVERIKEYTDIPS----ESNGYISPPANWPQTGDVELKNLSLRYSPHSSKALD----NVSFKV 57

  Fly  1103 EGCEKVGIVGRTGAGKSSLINALFRLS-YNEGAILIDRRDTNDLGLHDLRSKISIIPQEPVLFSG 1166
            :...||||||||||||||:|.|::||| :..|.|.||.:|...:.|..||:.||.|||:|.||.|
Yeast    58 KAGTKVGIVGRTGAGKSSIIAAIYRLSDWENGTITIDNKDIKHIPLERLRNSISCIPQDPTLFDG 122

  Fly  1167 TMRYNLDPFDEYSDAKLWESLEEVKLKQVVADL--------PS-----------GLQSKISEGGT 1212
            |:|.||||||.|||.:::..|.:|.|.:...:|        |:           .|.:.:..||:
Yeast   123 TVRSNLDPFDRYSDVQIYGVLSKVGLIEECDELCLIFEQEQPNFSSHKLRNRFIDLNTVVKSGGS 187

  Fly  1213 NFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTVMD 1277
            |.|.|||||:||||::|....|:::|||||::|..:||.||.|||...|:.|:|||||||.:|:|
Yeast   188 NLSQGQRQLLCLARSMLGARNIMLIDEATASIDYISDAKIQKTIRETMKNTTILTIAHRLRSVID 252

  Fly  1278 SDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQTGDSTFDALLKVAQ 1327
            .||:|||:.|:..|:..|:.|: :....:|:.:.:|:|:  |:.|.::|:
Yeast   253 YDKILVMEMGRVKEYDHPYTLI-SDRNTIFYRLCRQSGE--FENLFELAK 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 123/281 (44%)
ABC_membrane 98..367 CDD:294371
ABCC_MRP_domain1 443..643 CDD:213217
ABC_membrane 799..1027 CDD:294371
ABCC_MRP_domain2 1074..1295 CDD:213211 108/242 (45%)
YKR104WNP_013030.1 ABCC_NFT1 27..270 CDD:213269 110/246 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344647
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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