DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and ABCC1

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_001031116.1 Gene:ABCC1 / 839920 AraportID:AT1G30400 Length:1622 Species:Arabidopsis thaliana


Alignment Length:1425 Identity:481/1425 - (33%)
Similarity:745/1425 - (52%) Gaps:165/1425 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DELP--EN--PREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEK 67
            :|||  ||  |...:|:|.|:.|.:..|....|.|:.|.|.|::......:::.|......:|:|
plant   217 EELPGGENICPERHANLFDSIFFSWLNPLMTLGSKRPLTEKDVWHLDTWDKTETLMRSFQKSWDK 281

  Fly    68 EVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGDN 132
            |:||.:     |.||:|..|..|.|....|    ..:||...:|  |:|.|:......|.|..:.
plant   282 ELEKPK-----PWLLRALNNSLGGRFWWGG----FWKIGNDCSQ--FVGPLLLNELLKSMQLNEP 335

  Fly   133 QTKAYLYALGVILTSACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVV 197
            ....|:||:.:.:.....||....|...:..:|.:.|.|:.:.::||:|||:.........|::.
plant   336 AWIGYIYAISIFVGVVLGVLCEAQYFQNVMRVGYRLRSALIAAVFRKSLRLTNEGRKKFQTGKIT 400

  Fly   198 NLISNDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSV 262
            ||::.|...|......::.:|..|..|.:...|:|:::|:::..|...::|..|:|..:..||..
plant   401 NLMTTDAESLQQICQSLHTMWSAPFRIIVALVLLYQQLGVASIIGALFLVLMFPIQTVIISKTQK 465

  Fly   263 LRLKTALRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGTLQSFIM 327
            |..:...|||:|:.:|||:::.:..:|.||||..|...:..||..|::..|...    .|.:|.|
plant   466 LTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQ----LLSAFNM 526

  Fly   328 FV-TRISVFVSLVG---FVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRI 388
            |: ..|.|.|::|.   |.|||..||..:||...:.:::||..:.: .|..|:|.....||:.|:
plant   527 FILNSIPVLVTVVSFGVFSLLGGDLTPARAFTSLSLFSVLRFPLFM-LPNIITQMVNANVSLNRL 590

  Fly   389 QTFMLHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKAKWD 453
            :..:..||..                 |:..|.:              ...:.:|.|......||
plant   591 EEVLSTEERV-----------------LLPNPPI--------------EPGQPAISIRNGYFSWD 624

  Fly   454 QKNTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDS-GSVKVNGTLSYASQEPWL 517
            .|....||.||:|......||||:|..|.||:|||.|:||||...| .:|.:.|:::|..|..|:
plant   625 SKADRPTLSNINLDIPLGSLVAVVGSTGEGKTSLISAMLGELPARSDATVTLRGSVAYVPQVSWI 689

  Fly   518 FTGTVRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAV 582
            |..|||.|||||.|.|:.:|..|:...||:.|.||||..|.|.:||||.::|||||.|:|:||||
plant   690 FNATVRDNILFGAPFDQEKYERVIDVTALQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAV 754

  Fly   583 YRKADIYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAM 647
            |..:|:.:|||||||:|.|||:.:|::|::..|.:...:|||:||.||.|.|.|:::.:|.:...
plant   755 YSNSDVCILDDPLSALDAHVGQQVFEKCIKRELGQTTRVLVTNQLHFLSQVDKILLVHEGTVKEE 819

  Fly   648 GTYESMAKSGLDFAQMLTDPSKKDEGAGDAPDKKSLSRQNSKLRDRHGSISSMES---------- 702
            ||||.:..||..|.:::       |.||...|   .|.:|.:......|:..:|:          
plant   820 GTYEELCHSGPLFQRLM-------ENAGKVED---YSEENGEAEVDQTSVKPVENGNANNLQKDG 874

  Fly   703 --AAESLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFFC-IGAQVLASGGDIFLSY 764
              ...|....|.:..:|.|..|.:..|:.::|..|.|....::....| :..||.......:||.
plant   875 IETKNSKEGNSVLVKREERETGVVSWKVLERYQNALGGAWVVMMLVICYVLTQVFRVSSSTWLSE 939

  Fly   765 WVNKNGEAERDTFMARLRRAFPETRINADTDPV--DIYY----FTGINVSVI-IFSLVRSMLFFY 822
            |.:.               ..|:|.     .|:  :|.|    |..::|::| .:.|:.|.|:  
plant   940 WTDS---------------GTPKTH-----GPLFYNIVYALLSFGQVSVTLINSYWLIMSSLY-- 982

  Fly   823 LAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDE---ILPSVMMDVMQIFLAI 884
                ::..:|:.|...:.||.|.||.|||.|||:|||:||:|.:|.   :..::.|..:...|:.
plant   983 ----AAKKMHDAMLGSILRAPMVFFQTNPLGRIINRFAKDMGDIDRTVAVFVNMFMGSIAQLLST 1043

  Fly   885 VGIVVVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATIR 949
            |.::.::..:::|.|:.   |::|||...::|.:|||::||:::.||||:|:....:||||::||
plant  1044 VILIGIVSTLSLWAIMP---LLVVFYGAYLYYQNTSREIKRMDSTTRSPVYAQFGEALNGLSSIR 1105

  Fly   950 AFGAQKELIAEFDNYQDMHSSGYYMFLATSRAFGYWLDC-VCVVYIAVITLSFFLFSPENG---- 1009
            |:.|. :.:||. |.:.|.::  ..|...:.|...||.. :.|:...::.|:..|...:||    
plant  1106 AYKAY-DRMAEI-NGRSMDNN--IRFTLVNMAANRWLGIRLEVLGGLMVWLTASLAVMQNGKAAN 1166

  Fly  1010 -----GDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKD 1069
                 ..:||.::.|:.:|..:...:|.::..||::.:||||..|.::..|.....: |.:||..
plant  1167 QQAYASTMGLLLSYALSITSSLTAVLRLASLAENSLNSVERVGNYIEIPSEAPLVIE-NNRPPPG 1230

  Fly  1070 WPEDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFRL-SYNEG 1133
            ||..|.|.|:|:.|:|.|:...  ||..::..|...:|||||||||||||||:|||||: ...:|
plant  1231 WPSSGSIKFEDVVLRYRPELPP--VLHGVSFLISPMDKVGIVGRTGAGKSSLLNALFRIVELEKG 1293

  Fly  1134 AILIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVKLKQVVAD 1198
            .||||..|....||.|||..:.||||.|||||||:|:|||||.|::||.||||||...||..:..
plant  1294 RILIDECDIGRFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFSEHNDADLWESLERAHLKDTIRR 1358

  Fly  1199 LPSGLQSKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDC 1263
            .|.||.::::|.|.|||||||||:.||||:||.::|||:|||||.||.:||.|||.|||.:||.|
plant  1359 NPLGLDAEVTEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDVLIQKTIREEFKSC 1423

  Fly  1264 TVLTIAHRLHTVMDSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQTGDSTFDALLKVAQK 1328
            |:|.|||||:|::|.|||||:|:||..||.||..||:..|.. |..||:.||.:..:.|..:..:
plant  1424 TMLIIAHRLNTIIDCDKVLVLDSGKVQEFSSPENLLSNGESS-FSKMVQSTGTANAEYLRSITLE 1487

  Fly  1329 ----------------------------VGLRFKIQCNLSTCLSSLSSFQAHDDNLRLKK 1360
                                        ...:|.:..:|::..:.|.|.:..|||..|||
plant  1488 NKRTREANGDDSQPLEGQRKWQASSRWAAAAQFALAVSLTSSHNDLQSLEIEDDNSILKK 1547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 459/1328 (35%)
ABC_membrane 98..367 CDD:294371 75/272 (28%)
ABCC_MRP_domain1 443..643 CDD:213217 95/200 (48%)
ABC_membrane 799..1027 CDD:294371 73/245 (30%)
ABCC_MRP_domain2 1074..1295 CDD:213211 129/221 (58%)
ABCC1NP_001031116.1 PLN03130 1..1622 CDD:215595 481/1425 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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