DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4562 and ABCC5

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_171908.1 Gene:ABCC5 / 839277 AraportID:AT1G04120 Length:1514 Species:Arabidopsis thaliana


Alignment Length:1365 Identity:441/1365 - (32%)
Similarity:691/1365 - (50%) Gaps:135/1365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LPENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEKEVEKKR 73
            |...|...:.:.|.:...:..|....|.|:.|:..|:.......|:......|.:.|::  .|..
plant   225 LKVTPYSTAGLVSLITLSWLDPLLSAGSKRPLELKDIPLLAPRDRAKSSYKVLKSNWKR--CKSE 287

  Fly    74 KKKKTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGG-LVAYYADASNQEGDNQTKAY 137
            ...|.|||.:|.|..| |:.|....|...|.     |...::|. |::|:.|....:.....:.|
plant   288 NPSKPPSLARAIMKSF-WKEAACNAVFAGLN-----TLVSYVGPYLISYFVDYLGGKEIFPHEGY 346

  Fly   138 LYALGVILTS-ACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLIS 201
            :.| |:..|| ....:....:.:|:..:||..|.|:|:|:|||.|:||..|..:.|.|::||.::
plant   347 VLA-GIFFTSKLIETVTTRQWYMGVDILGMHVRSALTAMVYRKGLKLSSIAKQNHTSGEIVNYMA 410

  Fly   202 NDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLK 266
            .||.|:.....:::.:|:.|::|.:...::|:.:||:|...:...::.|.:...|.|.....:.|
plant   411 VDVQRIGDYSWYLHDIWMLPMQIVLALAILYKSVGIAAVATLVATIISILVTIPLAKVQEDYQDK 475

  Fly   267 TALRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGTLQSFIMFVTR 331
            .....|||:|..:|.:..::|:|:.|||..:...:..:|.:|...:|...|    .|:|:.|:..
plant   476 LMTAKDERMRKTSECLRNMRVLKLQAWEDRYRVRLEEMREEEYGWLRKALY----SQAFVTFIFW 536

  Fly   332 IS-VFVSLVGF---VLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFM 392
            .| :||:.|.|   :.||..|||.......|.:.||:..:. .||..:|..|:..||:.||..|:
plant   537 SSPIFVAAVTFATSIFLGTQLTAGGVLSALATFRILQEPLR-NFPDLVSMMAQTKVSLDRISGFL 600

  Fly   393 LHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKAKWDQKNT 457
            ..||                   |..:.||....|:    |....|.:..:..      ||..::
plant   601 QEEE-------------------LQEDATVVIPRGL----SNIAIEIKDGVFC------WDPFSS 636

  Fly   458 DNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSYASQEPWLFTGTV 522
            ..||..|.:|.:....|||.|.|||||||.|..:|||:...||.|::.||..|.||..|:.:|.:
plant   637 RPTLSGIQMKVEKGMRVAVCGTVGSGKSSFISCILGEIPKISGEVRICGTTGYVSQSAWIQSGNI 701

  Fly   523 RQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRKAD 587
            .:|||||.||:|.:|:.|::.|:|::|.||..:.|:||:||||.:||||||.|:.||||:|:.||
plant   702 EENILFGSPMEKTKYKNVIQACSLKKDIELFSHGDQTIIGERGINLSGGQKQRVQLARALYQDAD 766

  Fly   588 IYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTYES 652
            |||||||.||:|.|.|..||...:...|.|:.|:.||||::||..||:|:::.:|:|...|.|:.
plant   767 IYLLDDPFSALDAHTGSDLFRDYILSALAEKTVVFVTHQVEFLPAADLILVLKEGRIIQSGKYDD 831

  Fly   653 MAKSGLDFAQMLTD----------PSKKDEGAGDAPDKKSLSRQN-------------SKLRDRH 694
            :.::|.||..:::.          ||...|.:.:.|.:.||...|             :|.....
plant   832 LLQAGTDFKALVSAHHEAIEAMDIPSPSSEDSDENPIRDSLVLHNPKSDVFENDIETLAKEVQEG 896

  Fly   695 GSISSMESAAE-----SLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFFCIGAQVL 754
            ||.|.:::..|     ..:.:..:..:|.||:|::.||:|..|.||...|..|...       :|
plant   897 GSASDLKAIKEKKKKAKRSRKKQLVQEEERVKGKVSMKVYLSYMGAAYKGALIPLI-------IL 954

  Fly   755 ASGGDIFL----SYWVNKNGEAERDTFMARLRRAFPETRINADTDPVD----IYYFTGINVSVII 811
            |.....||    ::|:                 |:...:...|...||    :..:|.:.....:
plant   955 AQAAFQFLQIASNWWM-----------------AWANPQTEGDESKVDPTLLLIVYTALAFGSSV 1002

  Fly   812 FSLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDEILPSVMMD 876
            |..||:.|.....:.::..|...|.:.|.||.|.||::.|:||||||.|.|...||..:|..:..
plant  1003 FIFVRAALVATFGLAAAQKLFLNMLRSVFRAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGG 1067

  Fly   877 VMQIFLAIVGIVVVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSAS 941
            .....:.:.|||.|:..:.....|..|.:.:..:.::.:|:::||::.|:.::.:|||......|
plant  1068 FASTTIQLCGIVAVMTNVTWQVFLLVVPVAVACFWMQKYYMASSRELVRIVSIQKSPIIHLFGES 1132

  Fly   942 LNGLATIRAFGAQKELIAEFDNYQDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVITLSF---FL 1003
            :.|.||||.||.:|..|.......|.....::..:|...    || |:.:..::.:..:|   .|
plant  1133 IAGAATIRGFGQEKRFIKRNLYLLDCFVRPFFCSIAAIE----WL-CLRMELLSTLVFAFCMVLL 1192

  Fly  1004 FSPENG----GDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEG-----DFE 1059
            .|..:|    ...|||:|..:.:.|.:...:....:|||.:.::||:.:|..:..|.     || 
plant  1193 VSFPHGTIDPSMAGLAVTYGLNLNGRLSRWILSFCKLENKIISIERIYQYSQIVGEAPAIIEDF- 1256

  Fly  1060 SKPNKKPPKDWPEDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINA 1124
                 :||..||..|.|...|:.::|..:...  ||..::....|.:|:|||||||:|||:||.|
plant  1257 -----RPPSSWPATGTIELVDVKVRYAENLPT--VLHGVSCVFPGGKKIGIVGRTGSGKSTLIQA 1314

  Fly  1125 LFRL-SYNEGAILIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLE 1188
            |||| ....|.|.||..|.:.:|||||||::.||||:|.||.||:|.||||.:|:||.|:||:|:
plant  1315 LFRLIEPTAGKITIDNIDISQIGLHDLRSRLGIIPQDPTLFEGTIRANLDPLEEHSDDKIWEALD 1379

  Fly  1189 EVKLKQVVADLPSGLQSKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQ 1253
            :.:|..||......|.|.:.|.|.|:||||||||.|.||:|::.:|||:|||||:||..||.|||
plant  1380 KSQLGDVVRGKDLKLDSPVLENGDNWSVGQRQLVSLGRALLKQAKILVLDEATASVDTATDNLIQ 1444

  Fly  1254 TTIRNKFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQTGDST 1318
            ..||.:|:||||.|||||:.||:|||.|||:..|:..||.:|..||..........:.:.:..||
plant  1445 KIIRTEFEDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPARLLEDKSSMFLKLVTEYSSRST 1509

  Fly  1319  1318
            plant  1510  1509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 437/1342 (33%)
ABC_membrane 98..367 CDD:294371 74/274 (27%)
ABCC_MRP_domain1 443..643 CDD:213217 93/199 (47%)
ABC_membrane 799..1027 CDD:294371 62/234 (26%)
ABCC_MRP_domain2 1074..1295 CDD:213211 116/221 (52%)
ABCC5NP_171908.1 MRP_assoc_pro 229..1493 CDD:188098 438/1343 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2369
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.720

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