DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4562 and ABCG37

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_190916.1 Gene:ABCG37 / 824516 AraportID:AT3G53480 Length:1450 Species:Arabidopsis thaliana


Alignment Length:1093 Identity:221/1093 - (20%)
Similarity:400/1093 - (36%) Gaps:306/1093 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 ELLVSIRR--------IQTF-MLHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQT-----TGVLK 430
            :||..|||        :.|. :.:|..||..:.|.::    ||    |.||:..|     :.::|
plant   120 KLLKKIRRRIDRVGMELPTIEVRYESLKVVAECEVVE----GK----ALPTLWNTAKRVLSELVK 176

  Fly   431 PSSRRTSEAEHSIVISKLKAKWDQKNTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGEL 495
            .:..:|.||:.:|:              |.::.|   .||.:|..::||...||::|::|:.|.|
plant   177 LTGAKTHEAKINII--------------NDVNGI---IKPGRLTLLLGPPSCGKTTLLKALSGNL 224

  Fly   496 NPD---SGSVKVNG----------TLSYASQ-EPWLFTGTVRQNILFGLPMDKHRYRT-----VV 541
            ..:   ||.:..||          |.:|.|| :..:...|||:.:.|.........||     |.
plant   225 ENNLKCSGEISYNGHRLDEFVPQKTSAYISQYDLHIAEMTVRETVDFSARCQGVGSRTDIMMEVS 289

  Fly   542 KR-------------------------CALERDFEL----LPYADKTIVGE---RGASLSGGQKA 574
            ||                         .:|:.|:.|    |....:.::|:   ||  :|||||.
plant   290 KREKEKGIIPDTEVDAYMKAISVEGLQRSLQTDYILKILGLDICAEILIGDVMRRG--ISGGQKK 352

  Fly   575 RISLARAVYRKADIYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQA----DV 635
            |::.|..:........:|:..:.:|:.....:. :.::.|.......::...||...::    |.
plant   353 RLTTAEMIVGPTKALFMDEITNGLDSSTAFQIV-KSLQQFAHISSATVLVSLLQPAPESYDLFDD 416

  Fly   636 IVIMDKGKI-------SAMGTYESMA------KSGLDFAQMLTDPSKKDEGA----GDAP-DKKS 682
            |::|.||:|       ..:..:|...      |...||.|.:.  ||||:..    .|.| ...|
plant   417 IMLMAKGRIVYHGPRGEVLNFFEDCGFRCPERKGVADFLQEVI--SKKDQAQYWWHEDLPYSFVS 479

  Fly   683 LSRQNSKLRDRHGSISSMESAAESLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFF 747
            :...:.|.:|    :|..:...::|:  .|....:...:.     |....:....:.|||.    
plant   480 VEMLSKKFKD----LSIGKKIEDTLS--KPYDRSKSHKDA-----LSFSVYSLPNWELFIA---- 529

  Fly   748 CIGAQVLASGGDIFLSYWVNKNGEAERDTFMARLRRAFPETRINADTDPVDIYYFTGINVSVIIF 812
            ||..:.|....:.|:  ::.|..:.....|:.  ...|..||:..|....:.|      :|.:.|
plant   530 CISREYLLMKRNYFV--YIFKTAQLVMAAFIT--MTVFIRTRMGIDIIHGNSY------MSALFF 584

  Fly   813 SLV----------------------RSMLFFYLAMR---SSTTLH--NTMFQGVTRAAMHFF--- 847
            :|:                      :..|.||.|..   .:|.|.  .:.|:.:....:.::   
plant   585 ALIILLVDGFPELSMTAQRLAVFYKQKQLCFYPAWAYAIPATVLKVPLSFFESLVWTCLSYYVIG 649

  Fly   848 NTNPSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATVFLVIV---- 908
            .|..:.|...:|                        |:...|....|:::..||.:|..:|    
plant   650 YTPEASRFFKQF------------------------ILLFAVHFTSISMFRCLAAIFQTVVASIT 690

  Fly   909 ---FYLLRVFYLS------TSRDVKRLEAVTRSPI-YSHLSASLNGLATIRAFGAQKELIAEFDN 963
               |.:|..|..:      .|...........:|: |..:..|:|      .|.|.:....:.:|
plant   691 AGSFGILFTFVFAGFVIPPPSMPAWLKWGFWANPLSYGEIGLSVN------EFLAPRWNQMQPNN 749

  Fly   964 Y---------QDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVITLSF-FLFSPENGGDVGLAITQ 1018
            :         :.|..:||..:::.....|:     .|::..:.||:. ||.||          |.
plant   750 FTLGRTILQTRGMDYNGYMYWVSLCALLGF-----TVLFNIIFTLALTFLKSP----------TS 799

  Fly  1019 AMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIV------ 1077
            :..|.     ...:.:||:.|..:.|          :.....|....|.|...||..::      
plant   800 SRAMI-----SQDKLSELQGTEKSTE----------DSSVRKKTTDSPVKTEEEDKMVLPFKPLT 849

  Fly  1078 --FDDLSLKYFPDKAAD-----YVLRSLNIA--IEGCEKVGI----VGRTGAGKSSLINALF--- 1126
              |.||:  ||.|...:     |..:.|.:.  |.|..:.||    :|.:||||::|::.|.   
plant   850 VTFQDLN--YFVDMPVEMRDQGYDQKKLQLLSDITGAFRPGILTALMGVSGAGKTTLLDVLAGRK 912

  Fly  1127 RLSYNEGAILID---------RRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDP-FDEYSDA 1181
            ...|.||.|.|.         .|.:......|:.|. :|..:|.|::|..:|  |.| .|..:..
plant   913 TSGYIEGDIRISGFPKVQETFARVSGYCEQTDIHSP-NITVEESVIYSAWLR--LAPEIDATTKT 974

  Fly  1182 K-LWESLEEVKLKQVVADLPSGLQSKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVD 1245
            | :.:.||.::|.::...|..      ..|.:..|..||:.:.:|..::....|:.|||.|..:|
plant   975 KFVKQVLETIELDEIKDSLVG------VTGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1033

  Fly  1246 PQTDALIQTTIRN-----KFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFG 1293
            .:..|::...::|     :...||:...:..:....| :.||:...|:.:..|
plant  1034 ARAAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFD-ELVLLKRGGRMIYTG 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 221/1093 (20%)
ABC_membrane 98..367 CDD:294371
ABCC_MRP_domain1 443..643 CDD:213217 54/254 (21%)
ABC_membrane 799..1027 CDD:294371 45/281 (16%)
ABCC_MRP_domain2 1074..1295 CDD:213211 60/258 (23%)
ABCG37NP_190916.1 PLN03140 54..1450 CDD:215599 221/1093 (20%)
ABC_trans_N 89..167 CDD:291196 15/54 (28%)
ABCG_PDR_domain1 186..429 CDD:213200 56/262 (21%)
ABC2_membrane 530..735 CDD:279410 38/238 (16%)
PDR_assoc 742..804 CDD:285559 13/76 (17%)
ABCG_PDR_domain2 847..1085 CDD:213199 59/249 (24%)
ABC2_membrane 1180..1387 CDD:279410
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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