DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and l(2)03659

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_001260823.1 Gene:l(2)03659 / 47905 FlyBaseID:FBgn0010549 Length:1374 Species:Drosophila melanogaster


Alignment Length:1335 Identity:755/1335 - (56%)
Similarity:969/1335 - (72%) Gaps:52/1335 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QSMKADELPENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWE 66
            |:.|...||||||.:||..|||.|.:.:|.|.||.:||||..||||.|:|.:||.||::|.|:||
  Fly    79 QNEKEKVLPENPRARSNFISSLCFWYTIPIFRKGYRKTLDSTDLYRPLEEQKSDILGNRLCASWE 143

  Fly    67 KEVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGD 131
            :|:   :...::|||::|.:.||||:|...||.:|::|:|.|..||:||..|::|::.    |.|
  Fly   144 REL---KNDGRSPSLVRALLRVFGWQLGFPGLAIFVVELGLRTLQPIFLVKLISYFSG----EPD 201

  Fly   132 NQTKAYLYALGVILTSACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQV 196
            .....:.||:..|:.||..|:.:.|...|:.|:..|.|:||.|||:||||||::.||||||.|.|
  Fly   202 AANAGFYYAVAQIVISALTVMILTPTTFGIHHVCFKMRVAMGSMIFRKALRLTKGALGDTTSGHV 266

  Fly   197 VNLISNDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTS 261
            |||||||:.|||.:...::|||:||:::.:||||||:||||||.|||..||||:|:|.|||.:||
  Fly   267 VNLISNDIPRLDSAPYTVHYLWVGPLQVLVITYLMYQEIGISAVFGVLFMLLFMPIQMYLGTRTS 331

  Fly   262 VLRLKTALRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGTLQSFI 326
            .::||.|.|||.|:||:|||||.|||:||||||.||.:|:.:.|.||||.||...||||...:..
  Fly   332 AIQLKAAERTDNRIRMVNEIISAIQVLKMYAWEQPFEQMVTHAREKEMNTIRQGQYIRGFDFARR 396

  Fly   327 MFVTRISVFVSLVGFVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTF 391
            :.::|:::|:||||:|:|||:.|.|.||:||||||:|...|::|.|..|.|.|:.|.||||::.|
  Fly   397 IVLSRVAIFLSLVGYVILGKVFTPEIAFMITAYYNVLLAAMSIYVPSAIIQTAQFLTSIRRVEQF 461

  Fly   392 MLHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKAKWDQKN 456
            |..||....||||.              |:.....|....::......:.:|.|..||||||..:
  Fly   462 MQSEELGSSDKSEG--------------PSKDTVPGNPPSNNNEADLLKSAISIRDLKAKWDPNS 512

  Fly   457 TDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSYASQEPWLFTGT 521
            .|.||..|:|:.||..:|||||..||||||||||:||||..:||.::|||:|||.|||.|||:||
  Fly   513 PDYTLSGINLEIKPGSVVAVIGLTGSGKSSLIQAILGELKANSGQLQVNGSLSYTSQESWLFSGT 577

  Fly   522 VRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRKA 586
            ||||||||.|||..||..|||:|||||||:|||..|.||||||||:|||||||||||||:|||||
  Fly   578 VRQNILFGQPMDSQRYEEVVKKCALERDFDLLPLRDNTIVGERGATLSGGQKARISLARSVYRKA 642

  Fly   587 DIYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTYE 651
            .||||||||||||..|.|||||||:||.||...|:|||||.|||...|.|||:..|:|.|:|.||
  Fly   643 SIYLLDDPLSAVDASVARHLFDQCVRGHLRGSTVVLVTHQEQFLPHVDQIVILANGQIKALGDYE 707

  Fly   652 SMAKSGLDFAQMLTDPSKKDEGAGDAPDKKSLSRQNSKLRDRHGSISSMESAAESLAAESPMQTQ 716
            |:.|:||  ...|...||.|:...:..:..:|:..::|........:|.::...|.:.:..::.|
  Fly   708 SLLKTGL--ITGLGSLSKTDKAKTEEQEPLNLNSPDNKNEVTPIKENSEQTVGGSSSGKEHVERQ 770

  Fly   717 EGRVEGRIGMKLYKKYFGANGYGL--FIVFAFFCIGAQVLASGGDIFLSYWVNK------NGEAE 773
            |   .|.|.:.||:|||.|.| ||  |:|.....:.|||..:|||.||:|||.|      :||.|
  Fly   771 E---SGGISLALYRKYFQAGG-GLVAFLVMLSSSVLAQVAVTGGDYFLTYWVKKESTAAGHGEME 831

  Fly   774 RDTFMARLRRAFPETRINADTDPVDIYYFTGINVSVIIFSLVRSMLFFYLAMRSSTTLHNTMFQG 838
                             :.::..:|:|.:|.|.:..:|.:|..|.|.|.:|.::|..||||:|..
  Fly   832 -----------------DMESKSMDVYKYTLIIILSVIMNLSSSFLLFNIAKKASIRLHNTIFNR 879

  Fly   839 VTRAAMHFFNTNPSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATV 903
            ||||.||||:.|..|.|||||:||:.||||:||.|::|||||.|.:.||::|:..:|...::.|:
  Fly   880 VTRADMHFFSINKHGSILNRFTKDMSQVDEVLPVVLVDVMQIALWLAGIIIVIANVNPLLLVPTL 944

  Fly   904 FLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATIRAFGAQKELIAEFDNYQDMH 968
            .|.::||.||..||.||||:||:||:.|||:||||:||||||.||||..||:.|..|||:|||.|
  Fly   945 MLSVIFYHLRNLYLKTSRDLKRVEAINRSPVYSHLAASLNGLTTIRALDAQRVLEKEFDSYQDAH 1009

  Fly   969 SSGYYMFLATSRAFGYWLDCVCVVYIAVITLSFFLFSPENGGDVGLAITQAMGMTGMVQWGMRQS 1033
            ||.::|:::||:||||.::|:||:||::||||||.|.|.||.||||.||||||:..|||||:||:
  Fly  1010 SSAFFMYISTSQAFGYCMNCICVIYISIITLSFFAFPPGNGADVGLVITQAMGLIDMVQWGVRQT 1074

  Fly  1034 AELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIVFDDLSLKYFPDKAADYVLRSL 1098
            |||||||||||||||||.:||||..|:..:|||||.|||.|:|:|.:|:|:|.|:..|:.||:||
  Fly  1075 AELENTMTAVERVVEYESIEPEGMLEAPDDKKPPKTWPEQGEIIFKELNLRYTPNAKAENVLKSL 1139

  Fly  1099 NIAIEGCEKVGIVGRTGAGKSSLINALFRLSYNEGAILIDRRDTNDLGLHDLRSKISIIPQEPVL 1163
            :..|:..|||||||||||||||||||||||||.:|::|||.|||..:||||||.:||||||||||
  Fly  1140 SFVIQPREKVGIVGRTGAGKSSLINALFRLSYTDGSVLIDTRDTRQMGLHDLRRQISIIPQEPVL 1204

  Fly  1164 FSGTMRYNLDPFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKISEGGTNFSVGQRQLVCLARAI 1228
            |||||||||||||||||.|||..|||||||:||:|||.||.||||||||||||||||||||||||
  Fly  1205 FSGTMRYNLDPFDEYSDEKLWGCLEEVKLKEVVSDLPDGLASKISEGGTNFSVGQRQLVCLARAI 1269

  Fly  1229 LRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFG 1293
            |||||||||||||||||||||.|||.|||:||:|||||||||||||::|||||:|||||:.||||
  Fly  1270 LRENRILVMDEATANVDPQTDGLIQATIRSKFRDCTVLTIAHRLHTIIDSDKVMVMDAGRVVEFG 1334

  Fly  1294 SPFELLTTSEKKVFHSMVKQTGDSTFDALLKVAQK 1328
            ||:||:|.|:.||||::|.|:|.::::.|||:||:
  Fly  1335 SPYELMTKSDSKVFHNLVNQSGRASYEGLLKIAQE 1369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 736/1295 (57%)
ABC_membrane 98..367 CDD:294371 142/268 (53%)
ABCC_MRP_domain1 443..643 CDD:213217 140/199 (70%)
ABC_membrane 799..1027 CDD:294371 127/227 (56%)
ABCC_MRP_domain2 1074..1295 CDD:213211 175/220 (80%)
l(2)03659NP_001260823.1 CFTR_protein 89..1343 CDD:273530 737/1297 (57%)
ABC_membrane 171..437 CDD:294371 143/269 (53%)
ABCC_MRP_domain1 499..699 CDD:213217 140/199 (70%)
ABC_membrane 799..1045 CDD:294371 128/262 (49%)
ABCC_MRP_domain2 1115..1336 CDD:213211 175/220 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440876
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1131 1.000 Inparanoid score I210
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm26173
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
1312.810

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