DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and CG11898

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_651679.2 Gene:CG11898 / 43451 FlyBaseID:FBgn0039645 Length:1320 Species:Drosophila melanogaster


Alignment Length:1348 Identity:554/1348 - (41%)
Similarity:823/1348 - (61%) Gaps:96/1348 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEKEVEKKRKKK 76
            ||..|:|.||...|.:......||.::.||.:|||.......|..:.|.|...||:|:     |:
  Fly    11 NPVTKANFFSKWFFIWTREILVKGLQRNLDPSDLYETEPSLESTQVSSFLLGHWEQEL-----KR 70

  Fly    77 KTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAYLYAL 141
            ..|::|:.....:||......:|..|:.|....||||.|||||:::::::.:  ..:..|||||:
  Fly    71 SKPNVLRMIFKAYGWSFVPASIVYSIMAIAVHTTQPLMLGGLVSFFSESTGK--ITKHSAYLYAM 133

  Fly   142 GVILTSACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLISNDVGR 206
            ||:|.|..:.||.||:|..:|.:|.:.|:|...::|||.||:|..|......|..::|::.|:..
  Fly   134 GVVLCSLISGLFFHPFMKYLFRVGSRVRLACAGLVYRKFLRVSVAADNSGVSGYAISLMATDLPT 198

  Fly   207 LDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLKTALRT 271
            .:.|....:.||.||:|..:..|::|:.||..|..|:..::.||||||:..:..:..:..:|...
  Fly   199 FNESFYCFHELWRGPLEGVVFVYIIYQLIGWPAVVGLGTIVAFIPLQAWAARAIARYKRSSADVG 263

  Fly   272 DERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGTLQSFIMFVTRISVFV 336
            ||||::|||||:.:|:|||||||..|:|:|..||.:||::||...||...||...| ::::|:|:
  Fly   264 DERVKLMNEIIAAMQLIKMYAWEKSFAKLIGKVRKEEMDSIRGSTYIYAGLQCTGM-ISKLSLFL 327

  Fly   337 SLVGFVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEETK--- 398
            |||.:|..|.::|::|.|::.:||:.|.:::...:|:.|:.:.|..|...|::.|:...|..   
  Fly   328 SLVTYVFTGDIVTSQKVFIVASYYDHLNDSLLHSWPLAINMWVETFVVANRVKDFLFQHENPADG 392

  Fly   399 -VRDKSEDLDEQKLGK-AGLIAEPTVAQTTGVLKPSSRRTSEAE-HSIVISKLKAKWDQKNTDNT 460
             |.:..|..|..:.|. .|...:|                 :|| .||.:.||.|.||||..:..
  Fly   393 GVHNFKEAEDNPEHGNFFGRTHKP-----------------KAEVKSITVHKLSASWDQKKQEKR 440

  Fly   461 ---LDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSYASQEPWLFTGTV 522
               ::::|.:.:.:|.|.::|.||:|||:|:|.:||||:..||||:|||.||||.|||||..|::
  Fly   441 HRHIEDVSFQAQDQQFVGIVGTVGAGKSTLLQVILGELDIISGSVEVNGVLSYAPQEPWLLRGSL 505

  Fly   523 RQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRKAD 587
            |.||||..|.|:.||..|::.|.|:||.|.||..|.|.|||.|||||||||||:|||||||||||
  Fly   506 RDNILFTEPYDEQRYLEVLRVCHLDRDVEQLPLGDSTRVGEGGASLSGGQKARVSLARAVYRKAD 570

  Fly   588 IYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTYES 652
            ||||||||||||:||.:.|.|:|:..||.::|.:||||::|.|...|.:|:::.|:||..|.|::
  Fly   571 IYLLDDPLSAVDSHVSKMLLDRCLNEFLSKKIRILVTHRVQLLRHVDHLVLLEGGRISVQGHYDA 635

  Fly   653 MAK---------SGLDFAQMLTDPSKKDEGAGDAPD-KKSLSRQNSKLRDRHGSISSMESAAESL 707
            :.|         :.::.|::   .:.:.:...:.|: :||||::..  .|||             
  Fly   636 LKKLIRFRMSVANDVEVAKL---RAMRTDSVYEEPEPRKSLSQEEH--MDRH------------- 682

  Fly   708 AAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFFCIGAQVLASGGDIFLSYWVNKNGEA 772
              |...|.:|.:..|.:.::.||:||...|:.|.:|.               |.|.:.|.::.||
  Fly   683 --EIEQQFKEQQQIGSVKLQTYKEYFKVLGHPLVVVL---------------ILLMFVVARSSEA 730

  Fly   773 ERDTFMARLRRAFPETRINADTDPVDIYYFTGINVSV---------IIFSLVRSMLFFYLAMRSS 828
            ..|.|:::. ..:.||..| ..:|:..|:.|.:.:.:         :||.::|:..||.:.:|.|
  Fly   731 TMDIFLSKW-ATWEETEPN-QHEPIPEYHRTRLRMMILYTFLILCTLIFYVLRTFGFFMMTLRIS 793

  Fly   829 TTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCI 893
            ..:|:.:||||.||.||||....|||||||||.|:..:|..||..|||.::..:..:.::.|:..
  Fly   794 LRIHDQLFQGVIRAFMHFFTLATSGRILNRFSSDVLAIDVNLPQAMMDSIEFAVNALAVLAVVST 858

  Fly   894 INVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATIRAFGAQKELI 958
            .|:|.::....:|.:.|..|..|:..||.:||:|.::|||||||.:|:..|||||||....|.:.
  Fly   859 ANIWLLIPATVVVALLYGCRCLYIGASRSLKRIETISRSPIYSHTNATFKGLATIRALNGTKYME 923

  Fly   959 AEFDNYQDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVITLSFFLFSPENG---GDVGLAITQAM 1020
            .:|..||:.::|..|:.::.:|||.:|.|.:||:||..:|.||.||....|   |||||||||:|
  Fly   924 RDFHYYQNENTSALYLHVSINRAFAFWTDLICVLYILAVTFSFLLFDKHRGYYSGDVGLAITQSM 988

  Fly  1021 GMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIVFDDLSLKY 1085
            .:..|.|.||||:.||||.||:||||:||.::..|..:|::.:...||.||..|::.|.||.|:|
  Fly   989 KLVLMCQAGMRQTVELENMMTSVERVMEYVNIPSEPAYETEESVNLPKHWPSGGQLDFRDLRLRY 1053

  Fly  1086 FPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFRLSYNEGAILIDRRDTNDLGLHDL 1150
              .....|:|:.|...|.|.||:||||.|.|||||:::|||||::..|.|.||..:|:.||||||
  Fly  1054 --SNHGPYILKGLTFTIRGEEKIGIVGHTAAGKSSIVHALFRLAHINGHISIDGFETSQLGLHDL 1116

  Fly  1151 RSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKISEGGTNFS 1215
            |.:||||||:||||||::|:|||||:|.:|.:||.:||.||||:.|::|..|:..::.:.|.|||
  Fly  1117 RRRISIIPQDPVLFSGSLRFNLDPFEEKTDEELWLALEAVKLKEFVSNLKDGINCRLHDCGANFS 1181

  Fly  1216 VGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTVMDSDK 1280
            :|||||||||||:||:|:||:||||||||||:||.|||..|..||..|||||||||||||||:|:
  Fly  1182 MGQRQLVCLARALLRQNKILIMDEATANVDPETDNLIQEAIHTKFAHCTVLTIAHRLHTVMDNDR 1246

  Fly  1281 VLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQTGDSTFDALLKVAQK 1328
            |:|:|.|:.||.|.|.||| .:.....|..|::||..|...|..:|::
  Fly  1247 VMVVDMGRVVELGHPHELL-HNRHGYLHRFVEKTGVGTAQHLRHLAEQ 1293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 546/1318 (41%)
ABC_membrane 98..367 CDD:294371 103/268 (38%)
ABCC_MRP_domain1 443..643 CDD:213217 112/202 (55%)
ABC_membrane 799..1027 CDD:294371 95/239 (40%)
ABCC_MRP_domain2 1074..1295 CDD:213211 132/220 (60%)
CG11898NP_651679.2 CFTR_protein 9..1268 CDD:273530 547/1321 (41%)
ABC_membrane 92..358 CDD:294371 103/268 (38%)
ABCC_MRP_domain1 423..626 CDD:213217 112/202 (55%)
ABC_membrane 762..988 CDD:294371 91/225 (40%)
ABCC_MRP_domain2 1042..1261 CDD:213211 132/220 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440889
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
109.800

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