DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and rdog

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster


Alignment Length:1371 Identity:609/1371 - (44%)
Similarity:867/1371 - (63%) Gaps:86/1371 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEKEVEKKRK 74
            |:||..|:|.||...|.:....|.:|.:..|.:.:||:..:...|:.:.:|.:..||.|:     
  Fly    11 PKNPFTKANFFSQWSFWWMRDLFKRGLQGPLTDEELYQHRKTLDSERVTNKFAELWEDEL----- 70

  Fly    75 KKKTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAYLY 139
            |:..||:::..:..:|.....:||...|.|...:...||||||||.|:  |:||...::..||||
  Fly    71 KRSNPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYF--ATNQTDISENTAYLY 133

  Fly   140 ALGVILTSACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLISNDV 204
            |:|:::.....|:..||::..:|.:|.|.|:|::.:||||.|::|:::..|...|:.:|::|||:
  Fly   134 AMGIVICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVSKSSSNDGLRGRAINILSNDL 198

  Fly   205 GRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLKTAL 269
            ||.||::..::..|.||:|..:|.:||||||||||..||:.||.||||||:..||.:..|..||.
  Fly   199 GRFDVALCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQMTAE 263

  Fly   270 RTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGTLQSFIMFVTRISV 334
            |||.||::|||||.|||||||||||..|:::|..||.||:.|||...||...|....| ::.:||
  Fly   264 RTDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSM-ISPLSV 327

  Fly   335 FVSLVGFVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEETKV 399
            |::|..:|.||..|||:|.:.:::|:|:|.::|..::||.|:..||.|||.:|.:.|:|.     
  Fly   328 FLALCSYVYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLD----- 387

  Fly   400 RDKSE---DLD-EQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHS-------------IVISK 447
            .||:|   :|: .|:.||..........|....|..|.....:..|:             :|:..
  Fly   388 GDKAEVPINLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKN 452

  Fly   448 LKAKWDQK--NTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSY 510
            :.|.||..  :.:..:::.|...|.:.|.||:||||:||||.:..:|||:..|.|...|:|.:||
  Fly   453 VSASWDTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVHGKISY 517

  Fly   511 ASQEPWLFTGTVRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKAR 575
            ||||.|:|.||:|.||:|....::.||:.|||.|.||||.||||..|.|:|||||.|||||||||
  Fly   518 ASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQKAR 582

  Fly   576 ISLARAVYRKADIYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMD 640
            :|||||||||||||||||||||||||||:|:||:|:|.||..:|.:|||||:|:|...:.:::|.
  Fly   583 VSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLLLMG 647

  Fly   641 KGKISAMGTYESMAKSGLDFAQMLTDPSKKDEGAGDAPDKKS-LSRQNSK--LRDRHGSISSMES 702
            .|||.|.|:|:.:.:| ..| |.| :.::.||...|.....| |||.:|:  :..:|..:...:.
  Fly   648 SGKIMAQGSYQELQRS-RQF-QFL-EQTQHDESGIDTHSVSSYLSRSDSEKSMEHQHNQLLRPDE 709

  Fly   703 AAESLAAESPMQTQEGRVEGRIGMKLYKKYFGA--NGYGLFIVFAFFCIGAQVLASGGDIFLSYW 765
            ..|.:       .||.:..|.|.|.:|..|..|  :.:.|.||.:.| :.|:::.:|.|.|||.|
  Fly   710 HVEDV-------NQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLF-VCARIMLTGVDYFLSRW 766

  Fly   766 --------VNKNGEA--ERDTFMARLRRAFPETRINADTDP-----------------VDIYYFT 803
                    ||:....  |.||.:|  ....|   ||| |||                 :.::|.|
  Fly   767 VIWEEQIAVNRTTTLLNETDTTIA--NDTLP---INA-TDPYIAPLLASDIQAGIRQELVLFYAT 825

  Fly   804 GINVSVIIFSLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDE 868
            .:..::|:: |:|:..||.:.:|.|..||:.:|:|:|||:|:|||||.|||||||||||:..||.
  Fly   826 ILGATLIVY-LIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDT 889

  Fly   869 ILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSP 933
            .||..::|.:...:.:.|:|:::.|.|.|.::....:.::..::|..|::|||.|||||:::|||
  Fly   890 DLPHTLLDCLAFIIDVSGVVIIVAIANYWLLIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSP 954

  Fly   934 IYSHLSASLNGLATIRAFGAQKELIAEFDNYQDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVIT 998
            ::|..:.:..||.||||..||..|..||..||:.::|.:::||:.:|||..|.|.:|:||:..:|
  Fly   955 VFSLTNQTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIVYMTAVT 1019

  Fly   999 LSFFLFSPE-NGGDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKP 1062
            .||.|...| :.|||||||..:..||||.||||||:|||||.||:||||:||.:...|...|:..
  Fly  1020 FSFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPE 1084

  Fly  1063 NKKPPKDWPEDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFR 1127
            ..||..:||..|:|.|.:..|:|.|.:|.  ||:.||..||..||:||||||||||||:|.::||
  Fly  1085 KFKPKSEWPSKGRIEFINFKLRYSPKEAP--VLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFR 1147

  Fly  1128 LSYNEGAILIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVKL 1192
            |:.|||.|.||..|...:|||||||::|||||:|||||||:||||||.||.||.::|::|.:|:|
  Fly  1148 LACNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVEL 1212

  Fly  1193 KQVVADLPSGLQSKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIR 1257
            :..|:.|..||..::.:||:||||||||||||||||||.|:||:||||||||||:||.|||.|||
  Fly  1213 RSYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIR 1277

  Fly  1258 NKFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQTGDSTFDAL 1322
            :||..|||||||||||||||||:|||||||:..|.|.|:|||..: ......:|..||.:|..||
  Fly  1278 SKFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRT-GGYLRQLVDNTGAATSFAL 1341

  Fly  1323 LKVAQK 1328
            .:.|::
  Fly  1342 QQAAEQ 1347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 600/1339 (45%)
ABC_membrane 98..367 CDD:294371 123/268 (46%)
ABCC_MRP_domain1 443..643 CDD:213217 111/201 (55%)
ABC_membrane 799..1027 CDD:294371 97/228 (43%)
ABCC_MRP_domain2 1074..1295 CDD:213211 144/220 (65%)
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 607/1364 (45%)
ABC_membrane 94..360 CDD:294371 123/268 (46%)
ABCC_MRP_domain1 448..650 CDD:213217 111/201 (55%)
ABC_membrane 821..1046 CDD:294371 94/225 (42%)
ABCC_MRP_domain2 1096..1315 CDD:213211 144/220 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440891
Domainoid 1 1.000 179 1.000 Domainoid score I1056
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm14754
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X771
1110.800

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