DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4562 and Abcc6

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:XP_006541009.1 Gene:Abcc6 / 27421 MGIID:1351634 Length:1500 Species:Mus musculus


Alignment Length:1277 Identity:383/1277 - (29%)
Similarity:613/1277 - (48%) Gaps:156/1277 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DELPEN--PREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAW---- 65
            |..|.|  |..:::..|..||.:|....::|.||.|...||:...:|:.|:.|.|:|...|    
Mouse   270 DSQPLNPCPEAEASFPSKAMFWWASGLLWRGYKKLLGPKDLWSLGRENSSEELVSQLEREWRRSC 334

  Fly    66 ---------------EKEVEKKRKKKKTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFL 115
                           |.|...:.::.:...||:|...||..... ||.:..::...||...|..|
Mouse   335 NGLPGHKGHSSVGAPETEAFLQPERSQRGPLLRAIWRVFRSTFL-LGTLSLVISDAFRFAVPKLL 398

  Fly   116 GGLVAYYADASNQEGDNQTKAYL-YALGVIL-TSAC-NVLFMHPYMLGMFHIGMKARIAMTSMIY 177
            ...:.:.       ||..:.|:. :.|.|:: .:|| ..||...:|.....:.|:.|.|:|.::|
Mouse   399 SLFLEFM-------GDRNSSAWTGWLLAVLMFAAACLQTLFEQQHMYRAKVLQMRLRTAITGLVY 456

  Fly   178 RKALRLSRTALGDTTIGQVVNLISNDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFG 242
            ||.|.||..:...:..|.||||:|.|:.||..|:|::|.|||..:.|.:....:::.:|.||...
Mouse   457 RKVLVLSSGSRKSSAAGDVVNLVSVDIQRLAESIIYLNGLWLLFLWIFVCFVYLWQLLGPSALTA 521

  Fly   243 VAVMLLFIPLQAYLGKKTSVLRLKTALRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTK 307
            |||.|..:||..::.||....:.:...:...|.|:.:.::..::.||.:.||..|.:.:.::|.:
Mouse   522 VAVFLSLLPLNFFITKKRGFHQEEQMRQKASRARLTSSMLRTVRTIKSHGWEHAFLERLLHIRGQ 586

  Fly   308 EMNAIRNVNYIRGTLQSFIMFVT-RISVF-VSLVGF-----VLLGKLLTAEKAFVITAYYNILRN 365
            |::|::.     .||...:..|: ::|.| |:||.|     |.....:.||||||.....:|| |
Mouse   587 ELSALKT-----STLLFSVSLVSFQVSTFLVALVVFAVHTLVAEDNAMDAEKAFVTLTVLSIL-N 645

  Fly   366 TMTVYFPMGISQFAELLVSIRRIQTFMLHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLK 430
            ....:.|..:....:..||..|:..|:..||                     .:|     .|::.
Mouse   646 KAQAFLPFSVHCIVQARVSFDRLAAFLCLEE---------------------VDP-----NGMIA 684

  Fly   431 PSSRRTSEAEHSIVISKLKAKWDQKNTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGEL 495
            .:|||:|  :..|.:......|.|::.. .|..|:|......|:||:||||:|||||:.|:||||
Mouse   685 SNSRRSS--KDRISVHNGTFAWSQESPP-CLHGINLTVPQGCLLAVVGPVGAGKSSLLSALLGEL 746

  Fly   496 NPDSGSVKVNGTLSYASQEPWLFTGTVRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTI 560
            ....|||.:.|:::|..||.|:...:|.:|:.|...:|....:.|:..|||..|....|....|.
Mouse   747 LKVEGSVSIEGSVAYVPQEAWVQNTSVVENVCFRQELDLPWLQKVLDACALGSDVASFPAGVHTP 811

  Fly   561 VGERGASLSGGQKARISLARAVYRKADIYLLDDPLSAVDTHVGRHLFDQCM--RGFLREEIVLLV 623
            :||:|.:||||||.|:|||||||:||.||||||||:|:|.||.:.:|.|.:  .|.|:....:||
Mouse   812 IGEQGMNLSGGQKQRLSLARAVYKKAAIYLLDDPLAALDAHVSQQVFKQVIGPSGLLQGTTRILV 876

  Fly   624 THQLQFLEQADVIVIMDKGKISAMGTYESMAKSGLDFAQMLTDPSKKDEGAGDA----------- 677
            ||.|..|.|||.|:::..|.|:.||:|:.:.:.......:| |.:::..|..||           
Mouse   877 THTLHVLPQADRILVLANGTIAEMGSYQDLLQRNGALVGLL-DGARQPAGTHDAATSDDLGGFPG 940

  Fly   678 -------PDKKSLSRQNSKLRDRHGSISSMESAAESLAAESPMQTQEGRVEGRIGMKLYKKYFGA 735
                   ||:.. ..:.:.::.|..|...||::.:...|......::....||:...:|..|..|
Mouse   941 GGRPTCRPDRPR-PTEAAPVKGRSTSEVQMEASLDDPEATGLTAEEDSVRYGRVKTTIYLSYLRA 1004

  Fly   736 NGYGL--FIVFAFFCIGAQVLASGGDIFLSYWVNKNGEAERDTFMARLRRAFPETRINADTDPVD 798
            .|..|  :.:|.|.|  .||.:.....:||.|                          ||...||
Mouse  1005 VGTPLCTYTLFLFLC--QQVASFSQGYWLSLW--------------------------ADDPVVD 1041

  Fly   799 -----------IYYFTGINVSVIIFSLVRSMLFFYL-AMRSSTTLHNTMFQGVTRAAMHFFNTNP 851
                       ::...|...::.:|:   ||...:| ..|:|..|..::...|.|:.:.||...|
Mouse  1042 GRQMHAALRGWVFGLLGCLQAIGLFA---SMAAVFLGGARASGLLFRSLLWDVARSPIGFFERTP 1103

  Fly   852 SGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATVFLVIVFYLLRVFY 916
            .|.:||||||:...||..:|..:..::.....::.:.:.:.:.....|:|.:.|::::...:..|
Mouse  1104 VGNLLNRFSKETDTVDVDIPDKLRSLLTYAFGLLEVGLAVTMATPLAIVAILPLMVLYAGFQSLY 1168

  Fly   917 LSTSRDVKRLEAVTRSPIYSHLSASLNGLATIRAFGAQKELIAEFDNYQDMHSSGYYMFLATSRA 981
            ::||..::|||:...|.:.||::.:..|...:|||.||....|:.|...|.:....:..|...| 
Mouse  1169 VATSCQLRRLESARYSSVCSHMAETFQGSLVVRAFRAQASFTAQHDALMDENQRVSFPKLVADR- 1232

  Fly   982 FGYWLDCVC------VVYIAVITLSFFLFSPENGGDVGLAITQAMGMTGMVQWGMRQSAELENTM 1040
               ||....      :|::|. |.:....:..:.|.||.:::.|:.:|..:||.:|...:|||:|
Mouse  1233 ---WLATNLELLGNGLVFVAA-TCAVLSKAHLSAGLVGFSVSAALQVTQTLQWVVRSWTDLENSM 1293

  Fly  1041 TAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGC 1105
            .|||||.:|..:..|..:........|. ||..|:|.|.|..|::.|:  ....::.:::.|...
Mouse  1294 VAVERVQDYARIPKEAPWRLPTCAAQPL-WPCGGQIEFRDFGLRHRPE--LPLAVQGVSLKIHAG 1355

  Fly  1106 EKVGIVGRTGAGKSSLINALFRL-SYNEGAILIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMR 1169
            ||||||||||||||||...|.|| ...||.|.||......:|||.|||:|:||||:||||.|::|
Mouse  1356 EKVGIVGRTGAGKSSLAWGLLRLQEAAEGNIWIDGVPITHVGLHTLRSRITIIPQDPVLFPGSLR 1420

  Fly  1170 YNLDPFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKISEGG 1211
            .|||...|::|..:|.:||.|:||..|..||..||.:.:..|
Mouse  1421 MNLDLLQEHTDEGIWAALETVQLKAFVTSLPGQLQYECAGQG 1462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 381/1272 (30%)
ABC_membrane 98..367 CDD:294371 80/278 (29%)
ABCC_MRP_domain1 443..643 CDD:213217 87/201 (43%)
ABC_membrane 799..1027 CDD:294371 56/234 (24%)
ABCC_MRP_domain2 1074..1295 CDD:213211 65/139 (47%)
Abcc6XP_006541009.1 MRP_assoc_pro 101..1465 CDD:188098 383/1277 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841720
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.650

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