DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and ybt1

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_594585.1 Gene:ybt1 / 2542640 PomBaseID:SPAC9E9.12c Length:1427 Species:Schizosaccharomyces pombe


Alignment Length:1357 Identity:389/1357 - (28%)
Similarity:644/1357 - (47%) Gaps:179/1357 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NPREKSNIFSSLMFCFAM--PTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEKEVEKKRK 74
            :|.:..:|| ||:|.:..  ...:|..||.:...|: .||.:       ::.:..|.....|..:
pombe   192 SPEQTCSIF-SLIFTYGWLNGIIWKSWKKPITLTDV-PALPD-------TECTQIWYSRFAKNDR 247

  Fly    75 KK---------KTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEG 130
            |.         |:..||...::|.      :...||:        .||.:..|:.|..:..:.||
pombe   248 KSLMHTILLSLKSTILLMVFLSVL------VSSTLFV--------TPLAIKKLLQYLQNPKSDEG 298

  Fly   131 DNQ-TKAYLYALGVILTSACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTAL-----G 189
            ::. ...::..:|..|.|....|::|  :...|.:.:||  |:|.|||:|.| .|:|..     .
pombe   299 NSPFLWVFVLLIGPYLASVVKELYVH--VSRRFMLRIKA--AITQMIYKKVL-TSKTLFVAVDGS 358

  Fly   190 DTTIGQVVNLISNDVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQA 254
            ...:..|.||::.||..:......:..:...|:|:|:..|.:|:.:|.||:.|:.:.:|......
pombe   359 KINLDYVYNLLAKDVDNIGEMREFIGIIARAPLEMGVSMYFLYQLLGWSAYVGLLLAILSSSFPL 423

  Fly   255 YLGKKTSVLRLKTALRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIR 319
            .:..|.|.|.......:|||:|:..|::..|::.|::.||.|....|...|:.|:|.:.::....
pombe   424 LVASKISRLTSIANTSSDERIRLTTELLKSIKITKLFGWERPMLSRIQEKRSFEVNNMYSLTLFD 488

  Fly   320 GTLQSFIMFVTRISVFVSLVGFV-LLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLV 383
            ...:|.:.....||:|::...:. ::|..||...||...:.:.:||... ::......||.:..|
pombe   489 IIFKSGMKIAPFISMFITFAIYTKIMGHQLTPATAFTSISMFGLLRYQF-IWLASVSRQFIQFKV 552

  Fly   384 SIRRIQTFMLHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKL 448
            |::|:..|:.  ...|.|.|                                 .|:..|.|....
pombe   553 SLKRVDNFVY--GNMVNDSS---------------------------------IESSDSFVFENT 582

  Fly   449 KAKWDQKNTDNT----LDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSV---KVNG 506
            ...|..  |.:|    |.|::......|...|:|..|||||:|..|:||||:..||.:   .::.
pombe   583 SLSWSP--TPSTALFQLKNLNFTIPRNQFTLVVGSTGSGKSTLAMALLGELHVISGKMTTPSISQ 645

  Fly   507 TLSYASQEPWLFTGTVRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGG 571
            .::|..|..||..||:|.|||||.|.|:.||..::|.|.|:.|...:...|.|.:...|:|||||
pombe   646 RIAYVPQAAWLRNGTIRSNILFGEPYDEERYFQIIKACCLDSDLNSMNDGDLTYIHSNGSSLSGG 710

  Fly   572 QKARISLARAVYRKADIYLLDDPLSAVDTHVGRHLFDQC-MRGFLREEIVLLVTHQLQF-LEQAD 634
            ||.|:|||||:|..|::|:.||..||:|....|.:::.| :...|:.:.::|.||.:.. |..|:
pombe   711 QKQRVSLARALYSNAEVYIFDDIFSALDVSTSRKIYESCFLSTLLQHKTIILFTHNVSLCLPIAE 775

  Fly   635 VIVIMDKGKISAMGTYESMAKSGLDFAQMLTDPSKKDEGAGDAPDKKSLSRQNSKLRDRHGSISS 699
            .:::: |...:.:.:.:|:.:  |..:...:..:|||          ::..:|  |.....|..|
pombe   776 NVIVL-KNSTAQLVSPDSIQE--LVPSTFFSSNTKKD----------NIEEEN--LEPHSFSFDS 825

  Fly   700 MESAAESLAAESPMQTQEGRVEGR----IGMKLYKKYFGANGYGLFIVFAFFCIGAQVLASGGDI 760
                  :||:.|....|.......    :|:. |.||||:|.|.|..:  ...:.:||..:....
pombe   826 ------TLASSSDNDEQRDFASNSSIVLLGLH-YLKYFGSNKYILGSI--LLVMMSQVSLASIHF 881

  Fly   761 FLSYWVNKNGEAERDTFMARLRRAFPETRINADTDPVDIYYFTGINVSVIIFSLV---RSMLFFY 822
            :::.|      :....|..:|              |....:..|..:.:.|:.|:   |::.|..
pombe   882 WIALW------SGNSLFSLKL--------------PSSFSFLWGYAILLFIYFLMDLSRAITFAK 926

  Fly   823 LAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDEI----LPSVMMDVMQIFLA 883
            ....:|..:|:.:.:.|..:.:|:|....:||||||||||:...|.:    |..:::.||.|.:.
pombe   927 GGRTASENIHDILSERVLYSPLHWFEKTAAGRILNRFSKDMYATDNLLWASLEGMLLCVMAILIT 991

  Fly   884 IVGIVVVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATI 948
            ::.:.:|:.|    :::...|:.::.||....|....:.:..|::...||:::.|..:|.|:..|
pombe   992 MLNVTLVMPI----FMVPAAFVSLLVYLHGYAYSKAQKQLTSLQSSRTSPVFTMLGETLGGITVI 1052

  Fly   949 RAFGAQKELIAEFDN---YQDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVITLSFFLFS--PEN 1008
            |||  :||.|.|.:|   ..||....|..|     |...||.........::..|..|.:  .:|
pombe  1053 RAF--KKEKIFEHENMAFIDDMIQPLYISF-----AINRWLAIRTDGISGLVGFSTGLIALLRQN 1110

  Fly  1009 --GGDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKDWP 1071
              .|.||.::..|:|....|...:|.:.|:...:....|:.||..|..|.:..|...|...|:||
pombe  1111 IPPGLVGFSLNSAIGFNISVLVFVRANNEILTYINNFRRLYEYMLLPSEKNESSCLTKPMNKEWP 1175

  Fly  1072 EDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFRLS-YNEGAI 1135
            ..|.:...:|::.|...:||  ||..:|:.|...||:.||||||:|||::...|.|.: ...||:
pombe  1176 TLGHVSIKNLTVSYSIGQAA--VLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAV 1238

  Fly  1136 LIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKL--------WESLEEVKL 1192
            .:|..|.|.|.|..||.:||:|||:|||.|||:|.|||||:||.|.:|        .|||.:...
pombe  1239 EVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASN 1303

  Fly  1193 KQVVADLPSGLQSKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIR 1257
            |..:......|.:.:..||.|||.||||::.||||::|::||:::||:||:||..||..||..:|
pombe  1304 KNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLR 1368

  Fly  1258 NKFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQT 1314
            ..||..|||.||||:.|::|.|||||:|:||.||||||..|.|  :::.|..|.|::
pombe  1369 AAFKHATVLCIAHRIKTIVDYDKVLVLDSGKTVEFGSPKSLYT--QRRAFWKMCKES 1423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 385/1341 (29%)
ABC_membrane 98..367 CDD:294371 68/275 (25%)
ABCC_MRP_domain1 443..643 CDD:213217 75/208 (36%)
ABC_membrane 799..1027 CDD:294371 61/241 (25%)
ABCC_MRP_domain2 1074..1295 CDD:213211 107/229 (47%)
ybt1NP_594585.1 CFTR_protein 192..1416 CDD:273530 386/1348 (29%)
ABC_membrane 266..537 CDD:294371 69/289 (24%)
ABCC_MRP_domain1 577..782 CDD:213217 74/207 (36%)
ABC_membrane 866..1094 CDD:294371 59/260 (23%)
ABCC_MRP_domain2 1178..1406 CDD:213211 107/229 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - O PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.900

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