DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and ABCB9

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_062571.1 Gene:ABCB9 / 23457 HGNCID:50 Length:766 Species:Homo sapiens


Alignment Length:612 Identity:142/612 - (23%)
Similarity:271/612 - (44%) Gaps:123/612 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   741 FIVFAFFCIGAQVLASGGDIFLSYWVNKNGEAERDTFMARLRRAFPETRINADTDPVDIYYFTGI 805
            |:|.|.|.:   ::|:.|:.||.|:..               ||.....|....|.        .
Human   187 FLVAASFFL---IVAALGETFLPYYTG---------------RAIDGIVIQKSMDQ--------F 225

  Fly   806 NVSVIIFSL----------VRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFS 860
            :.:|:|..|          :|..:|..:..|.:..|.|.:|:.:......||:.|.:|.:::|.:
Human   226 STAVVIVCLLAIGSSFAAGIRGGIFTLIFARLNIRLRNCLFRSLVSQETSFFDENRTGDLISRLT 290

  Fly   861 KDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATVF-----LVIVFYLLRVFYLSTS 920
            .|...|.:::...:...::..:.:.|:||.:..:: |.:....|     :::|..:...:|...|
Human   291 SDTTMVSDLVSQNINVFLRNTVKVTGVVVFMFSLS-WQLSLVTFMGFPIIMMVSNIYGKYYKRLS 354

  Fly   921 RDVKRLEAVTRSPIYSHLSASLNGLATIRAFGAQKELIAEFDNY----QDMH-----SSGYYMFL 976
            ::|:  .|:.|:.  :....:::.:.|:|:|..::|   |.:.|    |.::     .:..||:.
Human   355 KEVQ--NALARAS--NTAEETISAMKTVRSFANEEE---EAEVYLRKLQQVYKLNRKEAAAYMYY 412

  Fly   977 ATSRAFGYWLDCVCVVY----------------IAVITLSFFLFSPENGGDVGLAITQAMGMTGM 1025
            .........:..|.::|                ||.|...|.|      ||       .|...|.
Human   413 VWGSGLTLLVVQVSILYYGGHLVISGQMTSGNLIAFIIYEFVL------GD-------CMESVGS 464

  Fly  1026 VQWGMRQSAELENTMTAVERVVEYEDLEP----EGDFESKPNKKPPKDWPE--DGKIVFDDLSLK 1084
            |..|:.|.      :.|.|:|.|:.|.:|    :|...           |:  :|::.|::::..
Human   465 VYSGLMQG------VGAAEKVFEFIDRQPTMVHDGSLA-----------PDHLEGRVDFENVTFT 512

  Fly  1085 YFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFRLSYNEGA-ILIDRRDTNDLGLH 1148
            | ..:....||::::.::...:...:||.:|:||||.:|.|......||. :|:|.:..:.....
Human   513 Y-RTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLEGGRVLLDGKPISAYDHK 576

  Fly  1149 DLRSKISIIPQEPVLFSGTMRYNLD------PFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKI 1207
            .|...||::.||||||:.::..|:.      ||:     .:.|:.::......:.:|..|..::.
Human   577 YLHRVISLVSQEPVLFARSITDNISYGLPTVPFE-----MVVEAAQKANAHGFIMELQDGYSTET 636

  Fly  1208 SEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRL 1272
            .|.|...|.||:|.|.:|||::|...:|::||||:.:|.:::.|||..|....:..|||.|||||
Human   637 GEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAIHGNLQKHTVLIIAHRL 701

  Fly  1273 HTVMDSDKVLVMDAGKAVEFGSPFELL 1299
            .||..:..::|:|.|:.|:.|:..:||
Human   702 STVEHAHLIVVLDKGRVVQQGTHQQLL 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 142/612 (23%)
ABC_membrane 98..367 CDD:294371
ABCC_MRP_domain1 443..643 CDD:213217
ABC_membrane 799..1027 CDD:294371 47/267 (18%)
ABCC_MRP_domain2 1074..1295 CDD:213211 69/227 (30%)
ABCB9NP_062571.1 3a01208 44..738 CDD:273363 142/612 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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