DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4562 and Abcc10

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:NP_001334325.1 Gene:Abcc10 / 224814 MGIID:2386976 Length:1526 Species:Mus musculus


Alignment Length:1396 Identity:441/1396 - (31%)
Similarity:695/1396 - (49%) Gaps:189/1396 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 SSLMFCFAMPTFFKGRKKTLDE-NDLYRALQEHRSDHLGSKLSAAWEKEVEKKRKKKKTPSLLKA 84
            |...:.:..|...:|.:..|.: .|..|..:......|.....|.|          |:...|.:|
Mouse   223 SRFSYAWLAPLLARGVRGELQQPRDTCRLPRRLHPAFLARVFQAHW----------KEGAQLWRA 277

  Fly    85 SMNVFGWRLAGLGLVLFI-LEIGFRVTQPLFLGGLVAYYADASNQEGDNQ-TKAYLYALGVILTS 147
            ....||.....|||:..: ..:||  :.||.|..||.:.     :||... :...||.||:...:
Mouse   278 LYRAFGCCYLALGLLKMVGTMLGF--SGPLLLSLLVGFL-----EEGQEPLSHGLLYVLGLAGGT 335

  Fly   148 ACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLISNDVGRLDVSVI 212
            ..:.:..:.|...:..:.::||:|:.|.:|||||:|..:.   ...|:|:||:..|..||     
Mouse   336 VISAVLQNQYGYEVRKVTLQARVAVLSTLYRKALKLGPSR---PPTGEVLNLLGTDSERL----- 392

  Fly   213 HMNY------LWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLKTALRT 271
             :|:      .|..|:::.|..||:|:::|::...|:.:.||.:|:...:..:......:.....
Mouse   393 -LNFAGSFHEAWGLPLQLAITLYLLYQQVGMAFLAGLVLALLLVPVNKVIATRIMASNQEMLRHK 456

  Fly   272 DERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGT---LQSFIMFVTRIS 333
            |.||::|.|::|||:|||.:.||......:...||||:..:|.:.|:...   |.:.:..|..|:
Mouse   457 DARVKLMTELLSGIRVIKFFRWEQALGDRVKACRTKELGRLRVIKYLDAACVYLWAALPVVICIT 521

  Fly   334 VFVSLVGFVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEETK 398
            :|::   :||:|..|||.|.|...|...:|...:. .||..|:...|..||:.|||.|:      
Mouse   522 IFIT---YVLMGHQLTATKVFTALALVRMLILPLN-NFPWVINGLLESKVSLDRIQRFL------ 576

  Fly   399 VRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKAKWDQKNTDNTLDN 463
                  ||.... .:|....:|          |:...|:...|..:.|     ||..........
Mouse   577 ------DLPSYS-PEAYYSPDP----------PAEPSTALELHEALFS-----WDPIGASQKTFI 619

  Fly   464 ISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGT---LSYASQEPWLFTGTVRQN 525
            ..|:.|...||.::|.||.|||||:.|:.|||:...|.|.|:..   ...|:||||:...|:|.|
Mouse   620 SHLQVKKGMLVGIVGKVGCGKSSLLAAITGELHRLCGWVAVSELSKGFGLATQEPWIQCATIRDN 684

  Fly   526 ILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRKADIYL 590
            ||||...|...||.|::.|||..|..:||..|:|.|||:|.:|||||:|||:||||||::..:||
Mouse   685 ILFGKTFDAQLYREVLEACALNDDLSILPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKALYL 749

  Fly   591 LDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTYESMAK 655
            |||||:|||..|..||..:|:.|.|.....||.||:.::||:|||:::|:.|::...|....:  
Mouse   750 LDDPLAAVDADVANHLLHRCILGVLSHTTRLLCTHRTEYLERADVVLLMEAGQLVRTGPPSEI-- 812

  Fly   656 SGLDFAQML-TDPSKKDEGA--GDAPDKKSLSRQNSKLRDRHGSISSMESAAESLAAESP----M 713
              |...|.: |..::|::.|  |.:|....|.|                :..|.|..|..    :
Mouse   813 --LPLVQAVPTAWAEKEQVATSGQSPSVCDLER----------------TTEEELEVEQSTCGCL 859

  Fly   714 QTQEGRVEGRIGMKLYKKYFGANGYGLFIVFAFFCIGAQVLASGGDIFLSYWVN-----KNGEAE 773
            ..:|.:.||.:.:.:|:.|:.|.|.||........:..|...:|.|.:|::|::     :||..|
Mouse   860 VQEESKSEGAVALHVYRAYWRAMGSGLAAAILVSLLLMQATRNGADWWLAHWLSQLKAGRNGSRE 924

  Fly   774 RDT---------FMARLRRAFP--------ETRIN--ADTDPVDIYYF-------TGINVSVIIF 812
            ...         |..||....|        .|.::  |.....|::::       .|:|   .:.
Mouse   925 DPASCSPGSTALFSPRLLLFSPGNLYTPLLSTPLHKAASNGTADVHFYLIVYATIAGVN---SLC 986

  Fly   813 SLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDEILPSVMMDV 877
            :|:|::||...|::::.:||:.:...:..|.:.|:::.||||:|||||.|:..||:.||.::..:
Mouse   987 TLLRAVLFAAGALQAAASLHHRLLHRLLMAPVTFYDSTPSGRVLNRFSSDVACVDDSLPFLLNIL 1051

  Fly   878 MQIFLAIVGIVVVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASL 942
            :...:.::|::.||.....|.:|....|..|:|.::.:|.::.|:::||.::|.||:||||:.:|
Mouse  1052 LANSVGLLGLLAVLGSGLPWLLLLLPPLSFVYYSVQGYYRASFRELRRLGSLTWSPLYSHLADTL 1116

  Fly   943 NGLATIRAFGAQKELIAEFDNYQDMHSSGYYMFLATSRAFGYWLD-------CVCVVYIAVITLS 1000
            .||..:||.||......|.....:::....:...||.:    |||       ...|..||.|.|.
Mouse  1117 AGLPVLRAAGATYRFEEENQRLLELNQRCQFASYATMQ----WLDIRLQLMGAAVVSAIAGIALV 1177

  Fly  1001 FFLFSPENGGDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKK 1065
            .......|.|.|||.::.|:.:||::...:....:.|..|.:|||:.||....|: :..|:|.:.
Mouse  1178 QHQQGLANPGLVGLVLSYALSLTGLLSGLVSSFTQTEAMMVSVERLEEYSCDVPQ-EPHSQPLQS 1241

  Fly  1066 PPK---DWPEDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFR 1127
            |.:   .|...|.:.|.|:.|.|.|  .....|..:...:|..||:|||||||:|||||...|||
Mouse  1242 PHQQRISWLTQGSVEFQDVVLVYRP--GLPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFR 1304

  Fly  1128 -LSYNEGAILIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVK 1191
             |..|.|.:|:|..||:.|.|.:|||::::|||||.|||||:|.||||...:.|..||::||:..
Mouse  1305 LLEPNAGRVLLDNVDTSQLELAELRSQLAVIPQEPFLFSGTIRENLDPQGLHEDRALWQALEQCH 1369

  Fly  1192 LKQVV------------------------ADLPSGLQSKISEGGTNFSVGQRQLVCLARAILREN 1232
            |.:|.                        |.|..||..::.|.|.|.|:|||||:|||||:|.:.
Mouse  1370 LSEVAVAMGESQACQRSQREAKNGHWQCSALLTGGLDGELGERGQNLSLGQRQLLCLARALLTDA 1434

  Fly  1233 RILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFGSPFE 1297
            :||.:|||||:||.:||.|:|.||..:|.:.|||||||||:|:::||:|||:.||:.||..||  
Mouse  1435 KILCIDEATASVDQKTDQLLQQTICKRFANKTVLTIAHRLNTILNSDRVLVLQAGRVVELDSP-- 1497

  Fly  1298 LLTTSEKKVFHSMVKQTGDSTFDALLKVAQK 1328
                       |.::....|.|..||:.:|:
Mouse  1498 -----------SALRNQPHSLFQQLLQSSQQ 1517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 435/1366 (32%)
ABC_membrane 98..367 CDD:294371 77/279 (28%)
ABCC_MRP_domain1 443..643 CDD:213217 90/202 (45%)
ABC_membrane 799..1027 CDD:294371 70/241 (29%)
ABCC_MRP_domain2 1074..1295 CDD:213211 113/245 (46%)
Abcc10NP_001334325.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841740
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.650

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