DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and LOC110439293

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:XP_021330365.1 Gene:LOC110439293 / 110439293 -ID:- Length:174 Species:Danio rerio


Alignment Length:103 Identity:25/103 - (24%)
Similarity:39/103 - (37%) Gaps:32/103 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   889 VVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATIRAFGA 953
            :.||:.:..: |.||:|::          ...||::.......|||       :..|..|.|.  
Zfish    75 LALCLASFGF-LETVYLLV----------ERRRDIEHHMVFLLSPI-------IRSLTMILAM-- 119

  Fly   954 QKELIAEFDNYQDMHSSGYYMFLATSRAFGYW-LDCVC 990
               |:...:..:...||   |||     |.:| |..||
Zfish   120 ---LMIHLERLRGFRSS---MFL-----FLFWMLAVVC 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 25/103 (24%)
ABC_membrane 98..367 CDD:294371
ABCC_MRP_domain1 443..643 CDD:213217
ABC_membrane 799..1027 CDD:294371 25/103 (24%)
ABCC_MRP_domain2 1074..1295 CDD:213211
LOC110439293XP_021330365.1 SunT 5..>161 CDD:331423 25/103 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586083
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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