DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and ice1

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:XP_002935180.3 Gene:ice1 / 100498517 XenbaseID:XB-GENE-6044166 Length:2065 Species:Xenopus tropicalis


Alignment Length:356 Identity:75/356 - (21%)
Similarity:133/356 - (37%) Gaps:83/356 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 SIRRIQTFMLH---------EETKVRDKSEDLDEQKLGKAGLIAEPTVA--QTTGVLKPSSRRTS 437
            ||..|||....         |||..|..::.:::...|...|::....|  ::|...|.:|.:: 
 Frog   870 SISTIQTLSDEDGEHYQGETEETPDRRNTDKIEKTVDGSTNLLSMSLAAFEKSTKACKINSNKS- 933

  Fly   438 EAEHSIVISKLKAKWDQKNTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSV 502
               |.|           .|::.|.:| :||   :|....:....:|...|::...|. |||:...
 Frog   934 ---HLI-----------NNSEQTFEN-TLK---KQTNIKVSEEKNGSQDLVRIDSGS-NPDNHIP 979

  Fly   503 KVNGTLSYASQE---------PWLFTGTVRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADK 558
            |...:.|...||         |..||.:       .:|..|    |.:.:|     .|.||...|
 Frog   980 KFKLSSSKHGQEHGHLLLNRKPAFFTES-------NIPPPK----TEILKC-----IESLPEHSK 1028

  Fly   559 TIVGERGASLSGGQKARISLARAVYRKADIYLLDDPLSAVDTHVGRHLFDQCMRGFLREEIVL-- 621
             |..|:       .|..|:.:.......|:::  .|.:.|.|.....|..:..:..|::..|:  
 Frog  1029 -IPSEQ-------TKENITSSDRFLHSTDLHV--KPANEVVTESYHQLLSKTSKLSLKDTDVMGT 1083

  Fly   622 -LVTHQLQFLEQADVIVIMD-KGKISAMGTYESMAKSGLDFAQMLTDPSKKDEGAGDAPDKK--- 681
             |....::.|:.|::..|.: :.|||...:..|:.|....:.....|   .|:...|.|.:|   
 Frog  1084 SLREINIKSLQAANLQEIQNSENKISEQSSVLSIFKMKEMYRSGYID---SDDSEDDFPVRKVNY 1145

  Fly   682 -------SLSRQNSKLRDRHGSISSMESAAE 705
                   |.:..|:.|..::.:..:.|.||:
 Frog  1146 AKFSSDNSAASANASLNLQNANKDTSELAAD 1176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 75/356 (21%)
ABC_membrane 98..367 CDD:294371
ABCC_MRP_domain1 443..643 CDD:213217 43/212 (20%)
ABC_membrane 799..1027 CDD:294371
ABCC_MRP_domain2 1074..1295 CDD:213211
ice1XP_002935180.3 Cast <25..249 CDD:401982
Herpes_BLLF1 <1409..1692 CDD:282904
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165170318
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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