DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4562 and LOC100493583

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:XP_031752469.1 Gene:LOC100493583 / 100493583 -ID:- Length:1289 Species:Xenopus tropicalis


Alignment Length:1333 Identity:479/1333 - (35%)
Similarity:740/1333 - (55%) Gaps:115/1333 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEKEVEKKRKK 75
            :||.:.:::.|.|.:.:.......|.||.|:..||:.......|..:.......|..||.::.:|
 Frog    22 DNPEKNASLLSRLTYSWYSRIITLGYKKPLEREDLFELNDNDSSYTVIPIFEKNWRNEVARQAQK 86

  Fly    76 ---KKTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAY 137
               .|..|||:|..|.|.:.|..:..:..|.:| ...:.|..|..::|:    :.:..|.....|
 Frog    87 GTVSKNVSLLRALWNTFKYSLIQVAFMKVIADI-LAFSSPQILKRMIAF----TEERPDEGWTGY 146

  Fly   138 LYALGVILTSACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLISN 202
            ..||.:::.:....|.:..|........:|.:.::..:||||||:|:.::....|.|::|||:|:
 Frog   147 ALALLLLVVTVSQTLILQLYQRFNMLAAVKMKTSVIGLIYRKALQLAYSSRKKFTTGELVNLMSS 211

  Fly   203 DVGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLKT 267
            |..:|....:::|.||..|.:|.:....:::|:|.|...||.|::|.||:.|::..:...|:...
 Frog   212 DAQQLMDLTVNLNLLWSAPFQILMAVVFLWQELGASVLAGVGVLILVIPINAFIASRVKQLKKSH 276

  Fly   268 ALRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRGTLQSFIMF-VTR 331
            ....|:|::::|||:.||:::|:||||..:.:.:..:|..||:.:::..|    |.:|.|. :|.
 Frog   277 LKSKDQRIKLLNEILHGIKILKLYAWEPSYQRKVADIRESEMDVLKSSGY----LTTFSMLTLTC 337

  Fly   332 ISVFVSLVGF---VLL--GKLLTAEKAFVITAYYNILRNTMTVY-FPMGISQFAELLVSIRRIQT 390
            |...||:..|   .||  ..:|||.|.|...:.:||||  :.:: .|..||...:..||:.|::.
 Frog   338 IPFLVSMATFGVYFLLDDANVLTASKVFTTISLFNILR--LPLFDLPTVISSVVQTRVSLGRLEN 400

  Fly   391 FMLHEETKVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKAKWDQK 455
            |...||.    .:|:::.:..|                           .|::..|....:|| |
 Frog   401 FFCGEEI----NTENIETKYSG---------------------------SHAVGFSGASFQWD-K 433

  Fly   456 NTDNTLDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSYASQEPWLFTG 520
            ...:.|.::..|.....||||:|.||||||||:.|:|||:|...|.|:..|.::|.||:.|:...
 Frog   434 TGPSILKDLDFKIPEGSLVAVVGQVGSGKSSLLSAILGEMNTLEGKVQRKGAVAYVSQQAWIQNA 498

  Fly   521 TVRQNILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRK 585
            ..::||||||..:|..|..|::.|||..|.||||..|:|.:||||.:||||||.|:|||||||..
 Frog   499 LFQENILFGLAFNKQHYERVLEACALLPDLELLPNGDQTEIGERGVNLSGGQKQRVSLARAVYSN 563

  Fly   586 ADIYLLDDPLSAVDTHVGRHLFDQCM--RGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMG 648
            ||||||||||||||.|||:||||:.:  :|.::.:..:||||.|..|.|.|:|::|::|:.:.:|
 Frog   564 ADIYLLDDPLSAVDVHVGKHLFDKLIGPKGLIKNKTRVLVTHSLTVLPQTDLIIVMEEGRAAHIG 628

  Fly   649 TYESMAKSGLDFAQML------TDPSKKDEGAGDAPDKKSLSRQNSKLRDRHGSISSMESAAESL 707
            ||:.:.....:||.|:      |:..:..:.||...|.|:|.|..|:..|  |.|....:..|  
 Frog   629 TYQELMSKRQNFADMIQTFNKGTENEQLSDTAGVFRDPKALQRTKSQHED--GFIKKDRTLTE-- 689

  Fly   708 AAESPMQTQEGRVEGRIGMKLYKKYFGANGYG--LFIVFAFFCIGAQVLASGGDIFLSYWVNKNG 770
            .::.|...:|....|.:.|.:..||..|.|:.  .|.|.|:  ||...||.|.:::||.|..: .
 Frog   690 MSKMPSMKKEKVATGNMRMSIVMKYLYAFGWSWVWFTVIAY--IGQNALAVGQNVWLSRWATE-A 751

  Fly   771 EAERDTFMARLRRAFPETRINADTDPVDIYYFTGINVSVIIFSLVRSMLFFYLA-------MRSS 828
            :..|:|      ..:.|.|.|.    :.||...|         .|:.:|..|.|       :.:|
 Frog   752 KGIRET------SEWTELRNNR----LGIYGLLG---------FVQGILVCYGAYVVTRGTICAS 797

  Fly   829 TTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCI 893
            ..|||.|...|....:.||.|.|.|::||||:||:..:||.....:...:...|.::|.::|:..
 Frog   798 RLLHNQMLDNVLHLPLQFFETTPMGQLLNRFTKDVYVIDERFHYYLRTWLNCMLDVLGTIIVIVY 862

  Fly   894 INVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATIRAFGAQKELI 958
            ....:|||.|.|..::.|::.:|:|:||.::||:..:|||:.||...:|.|..||||:|.|:..|
 Frog   863 ATPIFILAVVPLGFLYLLIQRYYISSSRQIRRLDGASRSPVISHFGETLMGAPTIRAYGHQERFI 927

  Fly   959 AEFDNYQDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVITLSF-FLFSPE-----NGGDVGLAIT 1017
            .:..:..:.:...||..:.::|    || .|.:.::..:.:.| .||:.:     |.|.|||:||
 Frog   928 NQNKDVVNENLVCYYNNVISNR----WL-AVRLEFLGSLMIFFAALFAVQAGDKMNSGIVGLSIT 987

  Fly  1018 QAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIVFDDLS 1082
            .|:.:|..:.:.:|::.|:|....|:||:.|||:::.|..:..  .|:||..||:.|.|.|.:..
 Frog   988 YALNITQTLNFWVRKACEIETNGVAIERICEYEEMQKEAPWIM--GKRPPVRWPDQGIIEFVNYK 1050

  Fly  1083 LKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFR-LSYNEGAILIDRRDTNDLG 1146
            .:|..|.  |..|:.:...:...||:|||||||||||:|.|.||| :....|.|:||..|...:|
 Frog  1051 ARYREDH--DLALQDITFRLHATEKLGIVGRTGAGKSTLTNCLFRTVEGTGGKIIIDGIDIATIG 1113

  Fly  1147 LHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKISEGG 1211
            |||||||::||||:|||||||::.||||.:::|||:|||:||...||..|..||..|...|||||
 Frog  1114 LHDLRSKLNIIPQDPVLFSGTLQMNLDPLEQHSDAELWEALELCHLKPFVMSLPKRLYHDISEGG 1178

  Fly  1212 TNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTVM 1276
            .|.|||||||:|||||:||:.:|||:|||||::|.:||.|:|.|||..|.||||||||||||:|:
 Frog  1179 ENLSVGQRQLICLARALLRKAKILVLDEATASIDMETDNLVQATIRKAFSDCTVLTIAHRLHSVL 1243

  Fly  1277 DSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHS 1309
            ||::|||:|||:.||||.|..|:   |||.:.|
 Frog  1244 DSERVLVLDAGRVVEFGEPQRLI---EKKGYFS 1273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 475/1321 (36%)
ABC_membrane 98..367 CDD:294371 78/274 (28%)
ABCC_MRP_domain1 443..643 CDD:213217 100/201 (50%)
ABC_membrane 799..1027 CDD:294371 73/240 (30%)
ABCC_MRP_domain2 1074..1295 CDD:213211 129/221 (58%)
LOC100493583XP_031752469.1 MRP_assoc_pro 24..1279 CDD:188098 478/1331 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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