DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and abcc4

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:XP_002939329.2 Gene:abcc4 / 100491006 XenbaseID:XB-GENE-957302 Length:1324 Species:Xenopus tropicalis


Alignment Length:1350 Identity:610/1350 - (45%)
Similarity:865/1350 - (64%) Gaps:90/1350 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRSDHLGSKLSAAWEKEVEKKRKKK 76
            ||.:.:|..|.:.|.:..|.|..|.|:.|:|:|:|..|.|..|..||.:|...||||::|.:.:.
 Frog    11 NPSQHANFCSKIFFWWLNPLFILGHKRKLEEDDMYEVLPEDASRKLGEELQWYWEKELQKAQNEG 75

  Fly    77 KTPSLLKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAYLYAL 141
            :.|.|.||.:.......:.|||..| .|...||.||:|||.:::|:......:......||:.|.
 Frog    76 RKPRLTKAIIRCHWKTFSVLGLFTF-FEESIRVVQPIFLGNVISYFERYDANDSAVLANAYINAA 139

  Fly   142 GVILTSACNVLFM---HPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLISND 203
            .:   |||.::..   |.|...:...|||.|:||..||||||||||.||:|.||.||:|||:|||
 Frog   140 AL---SACTLILAVVHHIYFYHLLRAGMKLRVAMCHMIYRKALRLSNTAMGKTTTGQIVNLLSND 201

  Fly   204 VGRLDVSVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLKTA 268
            |.:.|...|.:::||.||::...:|.|::.|||.|...|:||:::.:|||..|||..:.||.|||
 Frog   202 VNKFDQVTIFLHFLWAGPLQAIAVTVLLWMEIGPSCLAGMAVLIILMPLQLCLGKFFTSLRGKTA 266

  Fly   269 LRTDERVRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRG-TLQSFIMFVTRI 332
            ..||.|:|.|||:|||:::|||||||..|::::|.:|.||:|.:...:|:|. .|.||.: .::|
 Frog   267 AFTDTRIRTMNEVISGMRIIKMYAWEQSFTELVNNIRKKEINKVLRSSYLRALNLASFFV-ASKI 330

  Fly   333 SVFVSLVGFVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEET 397
            .:||:...:||||.:::|.:.||..:.|:.:|.|:|::||..:.:.:|..||||||:.|:|    
 Frog   331 ILFVTFTTYVLLGNVISASRVFVAVSLYSAVRLTVTLFFPSAVERASEAKVSIRRIKNFLL---- 391

  Fly   398 KVRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIV--ISKLKAKWDQKNTDNT 460
                    |||                   :.||:.....|.|.:::  |..:...||:.....|
 Frog   392 --------LDE-------------------IFKPALELPEENEENLLVQIQDVTCYWDKTLEIPT 429

  Fly   461 LDNISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSYASQEPWLFTGTVRQN 525
            |.|||...:|.:|:|||||||:|||||:.||||||..|.|.|.:.|.::|.||:||:|:||||.|
 Frog   430 LQNISCSVRPGELLAVIGPVGAGKSSLLSAVLGELPKDKGFVDIRGRIAYVSQQPWVFSGTVRSN 494

  Fly   526 ILFGLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRKADIYL 590
            ||||....:.:|..|::.|||::|...|...|.||:|:||.:||||||||::||||||:.|||||
 Frog   495 ILFGKEYVQEKYDKVLRVCALKKDMLQLDDGDLTIIGDRGVTLSGGQKARVNLARAVYQDADIYL 559

  Fly   591 LDDPLSAVDTHVGRHLFDQCMRGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTYESMAK 655
            |||||||||..||||||::|:...||:::.:|||||||:|..|..|:|:.:|::...||::.:.:
 Frog   560 LDDPLSAVDAEVGRHLFEKCICQALRKKLCILVTHQLQYLSAAKQILILKEGRMVGKGTFQELLQ 624

  Fly   656 SGLDFAQMLTDPSKKDEGAGDAPDKKSLSRQNSKL---RDRHGSISSM-----------ESAAES 706
            ||:|||.:|    |.:|      :::|.|::...:   |:|..|.||:           |.|.::
 Frog   625 SGIDFASLL----KSEE------EEQSQSQEGQLIKSSRNRTFSQSSVWSQDSTVQSHKEGATDN 679

  Fly   707 LAAESPMQT---QEGRVEGRIGMKLYKKYF-GANGYGLFIVFAFFCIGAQVLASGGDIFLSYWVN 767
            |||| |:.|   :|.|.||.:|.|:||||| ..:.|.:..|.....|.:||.....|.:||||.|
 Frog   680 LAAE-PVLTAIPEESRSEGTVGFKVYKKYFTSGSSYLMLFVVLLLNILSQVTYVLQDWWLSYWAN 743

  Fly   768 KNGEAERDTFMARLRRAFPETRINADTDPVDIY----YFTGINVSVIIFSLVRSMLFFYLAMRSS 828
            :.|         :|..........:.|:.:|:.    .:.|:.|:.|||.::|.:|.|::.:.::
 Frog   744 EQG---------KLNITSGTNSTGSKTEQLDLTLYLGVYAGLTVATIIFGVLRCLLVFHVLVCAA 799

  Fly   829 TTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQVDEILPSVMMDVMQIFLAIVGIVVVLCI 893
            ..|||.|||.:.:|.:.||:.||.||||||||||:|.:|:::|...:|.||:.|.|:|::.|...
 Frog   800 QALHNQMFQSLLKAPVLFFDRNPIGRILNRFSKDIGHLDDLMPFTFLDFMQVLLQILGVIAVAVA 864

  Fly   894 INVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVTRSPIYSHLSASLNGLATIRAFGAQKELI 958
            :..|.::..:.||||||.||.::|.||||:||||:.||||::||||:||.||.|||||.|:|...
 Frog   865 VIPWILIPLLPLVIVFYFLRRYFLDTSRDIKRLESTTRSPVFSHLSSSLQGLWTIRAFKAEKRFQ 929

  Fly   959 AEFDNYQDMHSSGYYMFLATSRAFGYWLDCVCVVYIAVITL-SFFLFSPENGGDVGLAITQAMGM 1022
            ..||..||:||..:::||.|||.....||.:|.|::..|.. |..|....:.|.||||::..|.:
 Frog   930 DLFDAQQDLHSEAWFLFLTTSRWLAVRLDAICAVFVIAIAFGSIILAENLDAGQVGLALSYGMTI 994

  Fly  1023 TGMVQWGMRQSAELENTMTAVERVVEYEDLEPEGDFESKPNKKPPKDWPEDGKIVFDDLSLKYFP 1087
            .|..|||:|||||:||.|.:.|||:||..||.|.::|||  ..||.|||..|.|.|::::..|..
 Frog   995 MGSFQWGVRQSAEVENLMISAERVMEYTQLEKEAEWESK--NPPPADWPNKGMITFENVNFSYSL 1057

  Fly  1088 DKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFRLSYNEGAILIDRRDTNDLGLHDLRS 1152
            |  ...|||.||..|...|||||||||||||||||.|||||:..||.|.||:..|:.|||||||.
 Frog  1058 D--GPVVLRHLNALIRPKEKVGIVGRTGAGKSSLIAALFRLAEPEGKIWIDKYLTSKLGLHDLRK 1120

  Fly  1153 KISIIPQEPVLFSGTMRYNLDPFDEYSDAKLWESLEEVKLKQVVADLPSGLQSKISEGGTNFSVG 1217
            |:||||||||||:||||.|||||||::|.:||:.||||:||:.|.:||..:::::||.|:|||||
 Frog  1121 KMSIIPQEPVLFTGTMRKNLDPFDEHADEELWDVLEEVQLKEAVEELPGKIETQLSESGSNFSVG 1185

  Fly  1218 QRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTVMDSDKVL 1282
            |||||||||||||.||||::|||||||||:||.|||.|||.||.:||||||||||:|::||||::
 Frog  1186 QRQLVCLARAILRRNRILIIDEATANVDPRTDELIQKTIREKFAECTVLTIAHRLNTIIDSDKIM 1250

  Fly  1283 VMDAGKAVEFGSPFELLTTSEKKVFHSMVKQTGDSTFDALLKVAQKVGLR 1332
            |:|||:..|:..|: ||..:::.:|:.||:|.|.:...||.:.|::|.|:
 Frog  1251 VLDAGRVKEYDEPY-LLLQNKESLFYKMVQQVGKAEATALNEAAKQVYLK 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 599/1316 (46%)
ABC_membrane 98..367 CDD:294371 115/272 (42%)
ABCC_MRP_domain1 443..643 CDD:213217 108/201 (54%)
ABC_membrane 799..1027 CDD:294371 101/232 (44%)
ABCC_MRP_domain2 1074..1295 CDD:213211 144/220 (65%)
abcc4XP_002939329.2 PLN03130 2..1289 CDD:215595 605/1338 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 225 1.000 Domainoid score I2471
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1027 1.000 Inparanoid score I277
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm47437
Panther 1 1.100 - - O PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5383
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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