Sequence 1: | NP_001262747.1 | Gene: | CG4562 / 42362 | FlyBaseID: | FBgn0038740 | Length: | 1408 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002942649.3 | Gene: | tap2 / 100489020 | XenbaseID: | XB-GENE-481680 | Length: | 728 | Species: | Xenopus tropicalis |
Alignment Length: | 695 | Identity: | 154/695 - (22%) |
---|---|---|---|
Similarity: | 296/695 - (42%) | Gaps: | 158/695 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 678 PDKKSLSRQNSKLRDRHGSISSMESAAESLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFI 742
Fly 743 VFAFFCIGAQVLASGGDIFLSYWVNK------NGEAERD-----TFMARLRRAFPETRINADTDP 796
Fly 797 VDIYYFTGINVSVIIFSLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSK 861
Fly 862 DLGQVDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATVFL--VIVFYLLRVFYLSTSRDVK 924
Fly 925 RL-EAVTRSPIYSHLSAS-LNGLATIRAFGAQKELIAEFDN-YQDMHSSGYYMFLATSRAFGYWL 986
Fly 987 DCVCVVYIAVITLSFFLFSPENGGDVGLAIT-----QAMGMTGMVQWGMRQS------------- 1033
Fly 1034 ------AELENTMTAVERVVEYEDLEPE---------GDFESKPNKKPPKDWPEDGKIVFDDLSL 1083
Fly 1084 KYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKSSLINALFRLSYNEGA-ILIDRRDTNDLGL 1147
Fly 1148 HDLRSKISIIPQEPVLFSGTMRYNLDPFDEYS--DAKLWESLEEVKLKQVVADLPSGLQSKISEG 1210
Fly 1211 GTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDALIQTTIRNKFKDCTVLTIAHRLHTV 1275
Fly 1276 MDSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMV----KQTGD 1316 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4562 | NP_001262747.1 | CFTR_protein | 12..1300 | CDD:273530 | 150/673 (22%) |
ABC_membrane | 98..367 | CDD:294371 | |||
ABCC_MRP_domain1 | 443..643 | CDD:213217 | |||
ABC_membrane | 799..1027 | CDD:294371 | 47/237 (20%) | ||
ABCC_MRP_domain2 | 1074..1295 | CDD:213211 | 68/223 (30%) | ||
tap2 | XP_002942649.3 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |