DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4562 and abcc2

DIOPT Version :9

Sequence 1:NP_001262747.1 Gene:CG4562 / 42362 FlyBaseID:FBgn0038740 Length:1408 Species:Drosophila melanogaster
Sequence 2:XP_004915926.1 Gene:abcc2 / 100485020 XenbaseID:XB-GENE-1012796 Length:1552 Species:Xenopus tropicalis


Alignment Length:1441 Identity:499/1441 - (34%)
Similarity:782/1441 - (54%) Gaps:201/1441 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SMKADELPENPREKSNIFSSLMFCFAMPTFFKGRKKTLDENDLYRALQEHRS-----------DH 56
            |.|.:...|||...::..|.:.|.:......||.||.|:..||:...:|.::           .|
 Frog   193 SEKNESTKENPELTASFLSRITFNWYNSIVVKGYKKPLEMEDLWELNEEDKTKNMYEIFEKHMKH 257

  Fly    57 LGSKLSAAWEK----------------------------EVEKKRKKKKTPS------------L 81
            ...|.....||                            |.:||.||||..|            |
 Frog   258 DVRKAKKDLEKRKNKRKQKESGIEMNGISKAQSQDILVMEEKKKEKKKKEKSIDGTAKDYPKRWL 322

  Fly    82 LKASMNVFGWRLAGLGLVLFILEIGFRVTQPLFLGGLVAYYADASNQEGDNQTKAYLYALGVILT 146
            :|..:..|...|....:...:.:: .....|..|..:|.:.||.|    .:|.:.:.||:.:::|
 Frog   323 IKTLIKTFPSTLLTSAIFKLLHDL-LAFVSPQILKVMVTFTADPS----QHQWQGFFYAVLLLVT 382

  Fly   147 SACNVLFMHPYMLGMFHIGMKARIAMTSMIYRKALRLSRTALGDTTIGQVVNLISNDVGR-LDV- 209
            :......:..|..|.|.:||:.|..:.:.:|:|||.:|.....::|:|:.|||:|.|..| :|: 
 Frog   383 ALLQSFLLQQYFHGCFVLGMRVRSLLMAAVYKKALTVSNAIRKESTVGETVNLMSADAQRFMDLT 447

  Fly   210 SVIHMNYLWLGPVEIGIITYLMYREIGISAFFGVAVMLLFIPLQAYLGKKTSVLRLKTALRTDER 274
            :.||:  ||..|::|.|....::.|:|.|...|:.||:|.||:.|.|...:..|::|.....|:|
 Frog   448 NFIHL--LWSSPLQIAISIVFLWEELGPSVLAGLGVMILLIPINAVLATVSRKLQMKNMKNKDKR 510

  Fly   275 VRMMNEIISGIQVIKMYAWEIPFSKMINYVRTKEMNAIRNVNYIRG------TLQSFIMFVTRIS 333
            :::||||::||:::|:||||..|...:..:|.||:..:.:..|:..      |...|::.|...:
 Frog   511 MKIMNEILNGIKILKLYAWEPSFENQVQEIREKELKDMLHFTYLHSVSLFVFTCAPFLVSVATFA 575

  Fly   334 VFVSLVGFVLLGKLLTAEKAFVITAYYNILRNTMTVYFPMGISQFAELLVSIRRIQTFMLHEETK 398
            |:|:    |....:|.|||||...:.:||||..:.: .||.||...:..||..|::.:       
 Frog   576 VYVA----VDPSNVLNAEKAFTSISLFNILRFPLAM-LPMLISSMVQTSVSSARLEKY------- 628

  Fly   399 VRDKSEDLDEQKLGKAGLIAEPTVAQTTGVLKPSSRRTSEAEHSIVISKLKAKWDQKNTDNTLDN 463
                   |....|..:.:..:|.:                 :.::..|.....|:: :.:..::|
 Frog   629 -------LGGDNLDTSAIRCDPNI-----------------DAAVQFSDATFSWEE-DANPAVNN 668

  Fly   464 ISLKFKPRQLVAVIGPVGSGKSSLIQAVLGELNPDSGSVKVNGTLSYASQEPWLFTGTVRQNILF 528
            ::|..|...||||:|.||||||||:.|:|||::...|.:.:.|:::|..|:.|:...|::.||||
 Frog   669 VNLDIKEGNLVAVVGGVGSGKSSLVSAMLGEMDHVGGYINIKGSIAYVPQQAWIQNATLKNNILF 733

  Fly   529 GLPMDKHRYRTVVKRCALERDFELLPYADKTIVGERGASLSGGQKARISLARAVYRKADIYLLDD 593
            |..||:.||:.|::.|||..|.|:||..|::.:||:|.:||||||.|:|||||||..||||:|||
 Frog   734 GSKMDEERYQKVLEACALLPDLEMLPGHDESEIGEKGINLSGGQKQRVSLARAVYNDADIYILDD 798

  Fly   594 PLSAVDTHVGRHLFDQCM--RGFLREEIVLLVTHQLQFLEQADVIVIMDKGKISAMGTYESMAKS 656
            ||||||.|||:|:|::.:  .|.|:.:..:||||.:.||:.||.||::...:::..|:|:::..:
 Frog   799 PLSAVDAHVGKHIFEKVVGPNGLLKNKTRILVTHGVSFLKHADDIVVLVNSRVTETGSYKTLQAN 863

  Fly   657 GLDFAQML---------TD------PSKKDEGAGDAPD---------KKSLSRQNSKLRDRHGSI 697
            ...||:.|         ||      ..:.||..||..:         ..::.|:||..:.:..|:
 Frog   864 NGAFAEFLRLYAKQNDQTDNEATVFTGEDDEDDGDQVETAEVIEDIVASTVKRENSMRQRKRSSV 928

  Fly   698 S--------------------SMESAAESLAAESPMQTQEGRVEGRIGMKLYKKYFGANGYGLFI 742
            |                    |.::..:.|..:..::|      |::..|||.||..|.|:|   
 Frog   929 SMNGTLRRSVKDVTKKKTGIGSNDTKGQKLIEKETVET------GKVKFKLYLKYLRAVGWG--- 984

  Fly   743 VFAFFCIGAQVLAS----GGDIFLSYWVNKNGEAER---DTFMARLRRAFPETRINADTDPVDIY 800
             |:|:...:.:|.:    |.:|:||.|   .|:||:   .|:.|..|    :.|:..        
 Frog   985 -FSFWIFVSYILQNAAFVGQNIWLSDW---TGDAEKYYNITYPASQR----DMRVGV-------- 1033

  Fly   801 YFTGINVSVIIFSLVRSMLFFYLAMRSSTTLHNTMFQGVTRAAMHFFNTNPSGRILNRFSKDLGQ 865
             |..:.|:..:|.|:.:.|....|:|:|..||..:...:.|..|.||:|.|:|||:|||:||:..
 Frog  1034 -FGALGVAQALFVLLGAFLVSGGAVRASRMLHTQLLHNILRVPMRFFDTTPTGRIVNRFAKDILT 1097

  Fly   866 VDEILPSVMMDVMQIFLAIVGIVVVLCIINVWYILATVFLVIVFYLLRVFYLSTSRDVKRLEAVT 930
            |||.:|......:..||.::|.:.::|:....:....|.|.|.:|.::.||::|||.::||::||
 Frog  1098 VDETIPMSFRSWIACFLGVIGTLFIICLATPIFAAVIVPLAIFYYFVQRFYVTTSRQLRRLDSVT 1162

  Fly   931 RSPIYSHLSASLNGLATIRAFGAQKELIAEFDNYQDMHSSGYYMFLATSRAFGYWLDCVCVVYIA 995
            |||||||...:::||:.|||:|.|...:...::..|.:....|.::.::|    || .:.:.::.
 Frog  1163 RSPIYSHFGETVSGLSVIRAYGHQDRFLQHNEDTIDNNQKSVYSWIVSNR----WL-AIRLEFVG 1222

  Fly   996 VITLSF-FLFS-----PENGGDVGLAITQAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDLEP 1054
            .:|:.| .||:     ..:.|.|||:|:.|:.:|..:.|.:|.::|||..:.|||||.||..:|.
 Frog  1223 NLTVFFAALFAVLGRGTVDSGTVGLSISSALNITQTLNWLVRMTSELETNIVAVERVDEYIKVER 1287

  Fly  1055 EGDFESKPNKKPPKDWPEDGKIVFDDLSLKYFPDKAADYVLRSLNIAIEGCEKVGIVGRTGAGKS 1119
            |..:..  :.:|||||||.|.:.|.|..::|.|:  .|.||:.::..|...||||||||||||||
 Frog  1288 EAQWVE--DHRPPKDWPEKGVVQFVDYKVRYRPE--LDLVLQGISCTINSMEKVGIVGRTGAGKS 1348

  Fly  1120 SLINALFRLSYNEGA-ILIDRRDTNDLGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDAKL 1183
            ||.|.:||:..:.|. |:||..|...:||||||.|::||||:||||||.:|.|||||::|:|..:
 Frog  1349 SLTNCIFRIIESAGGKIMIDGLDIASIGLHDLRQKLTIIPQDPVLFSGNLRMNLDPFNQYTDEDI 1413

  Fly  1184 WESLEEVKLKQVVADLPSGLQSKISEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQT 1248
            |::||...||..|..|...|..::||||.|.|||||||||||||:||:::||::|||||.||.:|
 Frog  1414 WKALELSHLKPFVEGLQEKLFHEVSEGGENLSVGQRQLVCLARALLRKSKILILDEATAAVDLET 1478

  Fly  1249 DALIQTTIRNKFKDCTVLTIAHRLHTVMDSDKVLVMDAGKAVEFGSPFELLTTSEKKVFHSMVKQ 1313
            |.|||.|||::|.|||||||||||||:|||.:::|:||||.:|||||.|||  ..:..|.||.|.
 Frog  1479 DNLIQRTIRSEFADCTVLTIAHRLHTIMDSSRLMVLDAGKIIEFGSPDELL--QRQGHFFSMAKD 1541

  Fly  1314 TG-DSTFDALL 1323
            .| |||...:|
 Frog  1542 AGIDSTQSTIL 1552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4562NP_001262747.1 CFTR_protein 12..1300 CDD:273530 486/1406 (35%)
ABC_membrane 98..367 CDD:294371 84/276 (30%)
ABCC_MRP_domain1 443..643 CDD:213217 93/201 (46%)
ABC_membrane 799..1027 CDD:294371 75/233 (32%)
ABCC_MRP_domain2 1074..1295 CDD:213211 128/221 (58%)
abcc2XP_004915926.1 MRP_assoc_pro 10..1544 CDD:188098 494/1431 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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