DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4572 and cpvl

DIOPT Version :9

Sequence 1:NP_650836.1 Gene:CG4572 / 42360 FlyBaseID:FBgn0038738 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001016807.1 Gene:cpvl / 549561 XenbaseID:XB-GENE-1014879 Length:482 Species:Xenopus tropicalis


Alignment Length:484 Identity:212/484 - (43%)
Similarity:298/484 - (61%) Gaps:34/484 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CAFLIIATIVAISGAKGVEGERPYRRSFINPYPRYQFFDDGV--------DPGEPLFLTPLINNA 63
            |.||:|:..|.:..........|:.|.|           .||        |||.||||||.:...
 Frog     6 CLFLLISLFVNLDLCCAARPTNPFGRMF-----------KGVKVTSRTREDPGIPLFLTPYLETG 59

  Fly    64 SMSKQEVQKLARVVGSQFHGVESYSGYLTVDPGFKSNMFFWYFPAEQEPEYAPVVLWLQGGPGAS 128
            .:  .|.:.|:.|.......|:||:|||||:..:.||||||:|||:..|..|||:||||||||.:
 Frog    60 KV--DEARALSLVGPLPGANVKSYAGYLTVNKTYNSNMFFWFFPAQVSPGDAPVLLWLQGGPGGT 122

  Fly   129 SLFGLFTENGPLELDGHGKLQKRNYTWSKTHNLIYIDNPVGTGFSFTENDAGYATNEKDVGRNLH 193
            |:||||.|:||..::.:..|..|.|:|::..:::|||||||||||||::|.|:|.::.||||:|:
 Frog   123 SMFGLFVEHGPYIVNENLTLGYRKYSWTEKFSVLYIDNPVGTGFSFTDDDKGFAKDQNDVGRDLY 187

  Fly   194 EAVMQLYELFEWSNSSGFWVTGESYAGKYVPALAYHIHKVQNAIETRVYVPLKGVAIGNGLSDPL 258
            .|:.|.:::|.....:.|:.||||||||||||:.|:|| ..|. ..:|.:..||:|||:||.||.
 Frog   188 SALTQFFQMFPEYQKNEFYATGESYAGKYVPAIGYYIH-THNP-TAKVKINFKGIAIGDGLCDPE 250

  Fly   259 HQL-KYGDYLYQLGLIDEHGLQSFHDAEAKGA-ECIKSHDMECAFDVFDSLINGDLTN-GSLFSN 320
            ..| .|.|:|||.|::||: .::|...:|..| :.|:......||||||:|:|||.|. .|.|.|
 Frog   251 MMLGGYADFLYQTGMVDEN-QKAFIQQQADLAIKYIQQEKWIEAFDVFDALLNGDRTEYPSFFQN 314

  Fly   321 LTGYNWYYNYLKTHDD-DGANLGEFLQAGATRRAIHVGNKTFHDLDKENKVELHLKKDIMDSVAP 384
            .||...|:|:|:..:. |....|.||.....|::|||||.||||   .::||.||..|:|.::.|
 Frog   315 ATGCTNYFNFLQCQEPLDQEYFGSFLSLSEVRKSIHVGNLTFHD---GSEVEKHLLSDVMKTIKP 376

  Fly   385 WIAELLAHYTVCIYSGQLDIIVAYPLTRNYLNQLKFPGSDKYKVAPREVWRV---GKEVAGYVKH 446
            |:|.|:.:|.|.:||||||:|||.|||..:|..:.:...::||.|.|.||:|   ..||||||:.
 Frog   377 WLAVLMDNYRVLLYSGQLDVIVAAPLTERFLPTVPWSKVEEYKKAERFVWKVLPTDTEVAGYVRV 441

  Fly   447 AGHLVEIMVRNAGHMAPHDQPKWLYMMID 475
            ||...:::||..||:.|:|||:..|.|||
 Frog   442 AGEFSQVIVRGGGHILPYDQPERSYAMID 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4572NP_650836.1 Peptidase_S10 83..479 CDD:298660 190/400 (48%)
cpvlNP_001016807.1 Peptidase_S10 77..474 CDD:366108 190/400 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 335 1.000 Domainoid score I1132
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H80235
Inparanoid 1 1.050 352 1.000 Inparanoid score I2211
OMA 1 1.010 - - QHG54069
OrthoDB 1 1.010 - - D274674at33208
OrthoFinder 1 1.000 - - FOG0003752
OrthoInspector 1 1.000 - - oto103259
Panther 1 1.100 - - LDO PTHR11802
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R172
SonicParanoid 1 1.000 - - X1443
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.