DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrm2 and rlmE

DIOPT Version :10

Sequence 1:NP_650835.1 Gene:Mrm2 / 42359 FlyBaseID:FBgn0038737 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_417646.1 Gene:rlmE / 947689 ECOCYCID:EG11507 Length:209 Species:Escherichia coli


Alignment Length:221 Identity:80/221 - (36%)
Similarity:107/221 - (48%) Gaps:23/221 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYGILRPGDTVLECGAAPGSWTQV 96
            |.||.||..||....:|.||::|:....|.|:.|||.||.....:.:||.||::.|||||.|:|.
E. coli     4 KKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQY 68

  Fly    97 AVERTNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTSSLAQKRLREALQDRKVNCVLSD 161
            .|  |...||      |.:.:.|||....:.|.....| ||...|..|.|.|.:.|.||..|:||
E. coli    69 VV--TQIGGK------GRIIACDLLPMDPIVGVDFLQG-DFRDELVMKALLERVGDSKVQVVMSD 124

  Fly   162 MAPNATGVRMLD-------QESITNLCYEVLRFALAMSAPQAHLVVKVWDNGDVPKLERDMLRFY 219
            ||||.:|...:|       .|....:|.:||       ||....||||:......:..|::...:
E. coli   125 MAPNMSGTPAVDIPRAMYLVELALEMCRDVL-------APGGSFVVKVFQGEGFDEYLREIRSLF 182

  Fly   220 EKVKRVKPRASRGDSAEHFLVARNFK 245
            .|||..||.:||..|.|.::||...|
E. coli   183 TKVKVRKPDSSRARSREVYIVATGRK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrm2NP_650835.1 RlmE 32..246 CDD:440062 80/221 (36%)
rlmENP_417646.1 rrmJ 1..208 CDD:183025 79/219 (36%)

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