DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mrm2 and SPB1

DIOPT Version :10

Sequence 1:NP_650835.1 Gene:Mrm2 / 42359 FlyBaseID:FBgn0038737 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_009877.1 Gene:SPB1 / 850304 SGDID:S000000559 Length:841 Species:Saccharomyces cerevisiae


Alignment Length:222 Identity:69/222 - (31%)
Similarity:105/222 - (47%) Gaps:22/222 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KQQPRNLKGRSKSSQEWLTRQLADPYVEKARMMNYRCRSAFKLLEIDDKYG-ILRPGDTVLECGA 88
            |.|.:|.|||            .|.|...|:...||.||:||:::|::||| .|.....|::..|
Yeast     3 KTQKKNSKGR------------LDRYYYLAKEKGYRARSSFKIIQINEKYGHFLEKSKVVIDLCA 55

  Fly    89 APGSWTQVAVERTNANGKQERAPQGAVFSIDLLHFHAVPGATIFGGMDFTSSLAQKRLREALQDR 153
            |||||.|||.:....|        ..:..:|::....:|....|.. |.|:...:.:||..::..
Yeast    56 APGSWCQVASKLCPVN--------SLIIGVDIVPMKPMPNVITFQS-DITTEDCRSKLRGYMKTW 111

  Fly   154 KVNCVLSDMAPNATGVRMLDQESITNLCYEVLRFALAMSAPQAHLVVKVWDNGDVPKLERDMLRF 218
            |.:.||.|.|||.....:.|..:.:.|..:.|:.|:.........|.|::.:.|..||.....:.
Yeast   112 KADTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQL 176

  Fly   219 YEKVKRVKPRASRGDSAEHFLVARNFK 245
            :|||:..||.|||..|||.|:|.:.||
Yeast   177 FEKVEATKPPASRNVSAEIFVVCKGFK 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mrm2NP_650835.1 RlmE 32..246 CDD:440062 66/215 (31%)
SPB1NP_009877.1 RlmE 1..204 CDD:440062 69/222 (31%)
DUF3381 236..384 CDD:463375
Spb1_C 621..835 CDD:462264
Blue background indicates that the domain is not in the aligned region.

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