DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MICU3 and micu-1

DIOPT Version :9

Sequence 1:NP_001262741.1 Gene:MICU3 / 42357 FlyBaseID:FBgn0038735 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001255723.1 Gene:micu-1 / 178287 WormBaseID:WBGene00013462 Length:534 Species:Caenorhabditis elegans


Alignment Length:543 Identity:148/543 - (27%)
Similarity:234/543 - (43%) Gaps:145/543 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 GVGRSARFSSSSSQMGRIPGHKTRRL------LTIVGGSAVSLAALAAFIK--LRSAENPVN-AV 80
            |||.| .:|||..|.........|:|      |.|.|  .|.|.:...::|  ::||..|.. ..
 Worm    72 GVGYS-HYSSSVYQHRPYIWPPLRKLYHWNYALVIAG--MVILMSDFEWLKDQIKSASLPFRPEA 133

  Fly    81 SLKRRMRD-DSELENV-------KLTARERRFIKFASVEYDDQL--------------------- 116
            |.|..:.: :.|:|.|       ||..||||.|     ||:|:|                     
 Worm   134 SQKEEVTESNGEVEEVKEKPKKKKLGFRERRII-----EYEDRLRLYSTPDKIFRYFATLKIIDP 193

  Fly   117 ---------YMTPQDFLDSVVEQEPRPRLKRRQLSSDEVDKYKENTPALKK-----GSTRLFRNL 167
                     :|||:|||.|......:||  |..|     |.:|...|...|     ....:|..|
 Worm   194 NEDSGRFEVFMTPEDFLRSFTPGVMQPR--RWGL-----DSFKNYNPEKHKRHKFSDPDSIFYKL 251

  Fly   168 RDKGIVSYTEYLFLLSILTKPKSGFRIAFNMFDTDGNQRVDKDEFLVIISILAGALKDTQNVDPQ 232
            .:.|::::::||||:::|:...:.|.:||.:||.|||..:||:||..:..::             
 Worm   252 GENGLINFSDYLFLMTLLSTSHADFALAFKIFDVDGNGALDKEEFTKVQQLI------------- 303

  Fly   233 TKRILSRLVSYDEQSQMTKPMAVPQAKRGIMERIFSGAWKEKHGEQEPEEELATPTPLEQNYVND 297
                         .||.|    |.|..|                      :..||   .|::   
 Worm   304 -------------MSQTT----VGQRHR----------------------DHITP---NQSF--- 323

  Fly   298 GEGLQRRHMVATTLQLHFFGKRGTGVINYDNFYRFMDNLQTEVLELEFHE---FSKGNSVISELD 359
                  |....:.|:.:||||.|.|.::.:.|..|.:.||.::|::||..   ....:.:|:|..
 Worm   324 ------RVETNSALETYFFGKDGKGSLSSEKFIEFQERLQHDILKMEFERRDALDNPDGLINEDS 382

  Fly   360 FAKILLRYTYLATDEYDVFLERLLERVKDE--KGISFHDFRDFCHFLNNLDDFTIAMRMYTLADR 422
            ||::||.:..:...:....|:|:..|.|.|  |||||.:.:.|..||.::||..||:..:.:|..
 Worm   383 FAQLLLLHAQINEKKQKHMLKRVKRRFKGENLKGISFGETKAFFEFLYHIDDVDIALHFHKMAGM 447

  Fly   423 AISKDEFSR-AVKICTGYKLSPHLIDTVFAIFDADGDGLLSYKEFIAIMKDRLHRGF---KVSGR 483
            :|......| |||: ||..||.|::|.|..:||.:.||.||::|.:|:|:.|:.||.   :.:|.
 Worm   448 SIDAKLLQRVAVKV-TGIPLSDHVVDVVITLFDDNLDGKLSHEEMVAVMRRRMRRGLERPRDTGL 511

  Fly   484 FFDYNEALD----AYDEPDYPLF 502
            |..::..|:    ||.....|.:
 Worm   512 FRLFDAVLECGKRAYHASPLPFY 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MICU3NP_001262741.1 EF-hand_7 421..470 CDD:290234 20/49 (41%)
EF-hand_8 424..473 CDD:290545 21/49 (43%)
micu-1NP_001255723.1 FRQ1 <254..352 CDD:227455 36/161 (22%)
EFh <254..298 CDD:298682 18/43 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D425365at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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